RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 ZC3H11AO75152 810 aaKnown RBP eCLIP23.62■■□□□ 1.376e-9■■■□□ 15.2
PTP4A3-204ENST00000521578 GFPT2O94808 682 aa23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 CBX1P83916 185 aa23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 ZBTB6Q15916 424 aa23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 ZNF572Q7Z3I7 529 aaPredicted RBP23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 FMNL3Q8IVF7 1028 aa23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 OR5B17Q8NGF7 314 aa23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 SP7Q8TDD2 431 aaPredicted RBP23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 TMC2Q8TDI7 906 aa23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 INTS2Q9H0H0 1204 aaKnown RBP23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 CWH43Q9H720 699 aa23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 UBQLN1Q9UMX0 589 aaKnown RBP23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 DERAQ9Y315 318 aa23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 PCDHA11Q9Y5I1 949 aa23.62■■□□□ 1.37
PTP4A3-204ENST00000521578 CASTOR2A6NHX0 329 aa23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 CA3P07451 260 aa23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 MYL7Q01449 175 aa23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 C1orf220Q5T0J3 134 aa23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 GJB7Q6PEY0 223 aa23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 WDR49Q8IV35 697 aa23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 NOA1Q8NC60 698 aaKnown RBP23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 MTMR12Q9C0I1 747 aa23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 ARFGAP3Q9NP61 516 aa23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 SLC38A7Q9NVC3 462 aa23.61■■□□□ 1.37
PTP4A3-204ENST00000521578 PMM2O15305 246 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 N4BP1O75113 896 aaKnown RBP23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 ARHGEF15O94989 841 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 TMEM191BP0C7N4 346 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 PNMA6AP0CW24 399 aaPredicted RBP23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 TCP1P17987 556 aaKnown RBP23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 RFX1P22670 979 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 PBX3P40426 434 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 DSC1Q08554 894 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 CETN1Q12798 172 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 TUSC3Q13454 348 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 BEST2Q8NFU1 509 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 ZNF516Q92618 1163 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 PAAF1Q9BRP4 392 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 MSRAQ9UJ68 235 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 DNAJC12Q9UKB3 198 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 HYOU1Q9Y4L1 999 aa23.6■■□□□ 1.37
PTP4A3-204ENST00000521578 A0A1W2PPC1 479 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 SOX5P35711 763 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 ITIH3Q06033 890 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 DUOXA2Q1HG44 320 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 NT5DC4Q86YG4 428 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 CREG2Q8IUH2 290 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 COLGALT2Q8IYK4 626 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 KRT222Q8N1A0 295 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 LMO3Q8TAP4 145 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 ANKRD36BP1Q96IX9 119 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 TSPAN18Q96SJ8 248 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 PNKPQ96T60 521 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 PCDHGC5Q9Y5F6 944 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 F8VZ95 297 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 XPOTO43592 962 aaKnown RBP23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 OR1G1P47890 313 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 CLDN10P78369 228 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 RAB30Q15771 203 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 VPS36Q86VN1 386 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 DPP3Q9NY33 737 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 APEX2Q9UBZ4 518 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 NAGPAQ9UK23 515 aa23.59■■□□□ 1.37
PTP4A3-204ENST00000521578 CHD9Q3L8U1 2897 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 LINC01553A4QN01 128 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 NT5C1B-RDH14C9J2C7 533 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 PDE2AO00408 941 aaPredicted RBP23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 ZNF185O15231 689 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 SEC31AO94979 1220 aaKnown RBP23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 TNNC2P02585 160 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 GCLMP48507 274 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 PPP3CAQ08209 521 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 SPRED2Q7Z698 418 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 CAPZA3Q96KX2 299 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 OSBPL9Q96SU4 736 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 TLR10Q9BXR5 811 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 NKX2-4Q9H2Z4 354 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 INTUQ9ULD6 942 aa23.58■■□□□ 1.37
PTP4A3-204ENST00000521578 BUB1O43683 1085 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 RHOXF2BP0C7M4 288 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 CYP3A5P20815 502 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 SLC11A1P49279 550 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 CLCNKBP51801 687 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 BCAR1P56945 870 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 DRAP1Q14919 205 aaPredicted RBP23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 SCARA3Q6AZY7 606 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 WDR93Q6P2C0 686 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 ALKBH5Q6P6C2 394 aaKnown RBP23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 C1orf127Q8N9H9 656 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 RHOXF2Q9BQY4 288 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 PACSIN1Q9BY11 444 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 GPR88Q9GZN0 384 aa23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 PRG3Q9Y2Y8 225 aaPredicted RBP23.57■■□□□ 1.36
PTP4A3-204ENST00000521578 CHD7Q9P2D1 2997 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 F8W810 466 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 ALDH2P05091 517 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 GALTP07902 379 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 CCDC172P0C7W6 258 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 DNAJB2P25686 324 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 ALDH7A1P49419 539 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms