RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 TACC1O75410 805 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 CST3P01034 146 aaPredicted RBP13.4□□□□□ -0.26
HDAC2-211ENST00000521233 TPM2P07951 284 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 TRIM21P19474 475 aaKnown RBP13.4□□□□□ -0.26
HDAC2-211ENST00000521233 NOP14P78316 857 aaKnown RBP13.4□□□□□ -0.26
HDAC2-211ENST00000521233 TSPY1Q01534 308 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 ROR1Q01973 937 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 SMARCB1Q12824 385 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 KCNC3Q14003 757 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 AAK1Q2M2I8 961 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 ZSCAN23Q3MJ62 389 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 ANO6Q4KMQ2 910 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 WDR44Q5JSH3 913 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 LLGL2Q6P1M3 1020 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 EP400NLQ6ZTU2 488 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 RTL10Q7L3V2 364 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 LIMS2Q7Z4I7 341 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 GLYCTKQ8IVS8 523 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 ANKRD20A12PQ8NF67 263 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 SLC22A17Q8WUG5 538 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 DNAI2Q9GZS0 605 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 NIF3L1Q9GZT8 377 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 FAM124BQ9H5Z6 455 aaPredicted RBP13.4□□□□□ -0.26
HDAC2-211ENST00000521233 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 RAB20Q9NX57 234 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 NXF1Q9UBU9 619 aaKnown RBP13.4□□□□□ -0.26
HDAC2-211ENST00000521233 FBXW11Q9UKB1 542 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 COQ4Q9Y3A0 265 aa13.4□□□□□ -0.26
HDAC2-211ENST00000521233 KCNJ18B7U540 433 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 TGM5O43548 720 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 TBX10O75333 385 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 GLP2RO95838 553 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 EPCAMP16422 314 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
HDAC2-211ENST00000521233 GTF2F1P35269 517 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDAC2-211ENST00000521233 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 KCNJ12Q14500 433 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 MAN2A1Q16706 1144 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 SOWAHAQ2M3V2 549 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 CBWD6Q4V339 395 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 CBWD3Q5JTY5 395 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 CBWD5Q5RIA9 395 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 ANKRD54Q6NXT1 300 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 DCP1BQ8IZD4 617 aaKnown RBP13.39□□□□□ -0.27
HDAC2-211ENST00000521233 TTC39CQ8N584 583 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 ZNF461Q8TAF7 563 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 ACBD6Q9BR61 282 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 SNX25Q9H3E2 840 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 CYP3A43Q9HB55 503 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 MAN1C1Q9NR34 630 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 AFF4Q9UHB7 1163 aaKnown RBP13.39□□□□□ -0.27
HDAC2-211ENST00000521233 FAM50BQ9Y247 325 aa13.39□□□□□ -0.27
HDAC2-211ENST00000521233 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
HDAC2-211ENST00000521233 SMTNL1A8MU46 457 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 GABRDO14764 452 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 LINC01565O15544 149 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 ADAM12O43184 909 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 KCNA5P22460 613 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 HOXA9P31269 272 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 ELF1P32519 619 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 ZNF165P49910 485 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 ARPP19P56211 112 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 GPR17Q13304 367 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 MAPRE1Q15691 268 aaKnown RBP13.38□□□□□ -0.27
HDAC2-211ENST00000521233 NFE2Q16621 373 aaPredicted RBP13.38□□□□□ -0.27
HDAC2-211ENST00000521233 PUS10Q3MIT2 529 aaKnown RBP13.38□□□□□ -0.27
HDAC2-211ENST00000521233 CDKAL1Q5VV42 579 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 LILRA6Q6PI73 481 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 SCARA5Q6ZMJ2 495 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 PALB2Q86YC2 1186 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 IRF2BP1Q8IU81 584 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 CREBRFQ8IUR6 639 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 AOPEPQ8N6M6 819 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 KREMEN2Q8NCW0 462 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 VN1R2Q8NFZ6 395 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 C2orf15Q8WU43 125 aaKnown RBP13.38□□□□□ -0.27
HDAC2-211ENST00000521233 KBTBD7Q8WVZ9 684 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 FUCA2Q9BTY2 467 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 ZCWPW1Q9H0M4 648 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 DDX43Q9NXZ2 648 aaKnown RBP13.38□□□□□ -0.27
HDAC2-211ENST00000521233 CD207Q9UJ71 328 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 BARX2Q9UMQ3 279 aaPredicted RBP13.38□□□□□ -0.27
HDAC2-211ENST00000521233 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
HDAC2-211ENST00000521233 WDR27A2RRH5 827 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 GTPBP10A4D1E9 387 aaKnown RBP13.37□□□□□ -0.27
HDAC2-211ENST00000521233 BECN2A8MW95 431 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 ABLIM3O94929 683 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 POU2F2P09086 479 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 HNRNPA1P09651 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
HDAC2-211ENST00000521233 ATF2P15336 505 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 TBXAS1P24557 533 aaPredicted RBP13.37□□□□□ -0.27
HDAC2-211ENST00000521233 ASPAP45381 313 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 YWHAEP62258 255 aaKnown RBP13.37□□□□□ -0.27
HDAC2-211ENST00000521233 TPM4P67936 248 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 ITIH3Q06033 890 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 UVSSAQ2YD98 709 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 LEXMQ3ZCV2 418 aa13.37□□□□□ -0.27
HDAC2-211ENST00000521233 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms