RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 FSTL4Q6MZW2 842 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 ZPBP2Q6X784 338 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 TTC9BQ8N6N2 239 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 FAM83CQ9BQN1 747 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 IL21Q9HBE4 155 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 DDX19AQ9NUU7 478 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 LRWD1Q9UFC0 647 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 ZMYM5Q9UJ78 669 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 ZMIZ1Q9ULJ6 1067 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 SLC27A5Q9Y2P5 690 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 STK24Q9Y6E0 443 aa13.43□□□□□ -0.26
TRAPPC9-204ENST00000518723 CITO14578 2027 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 NUP210Q8TEM1 1887 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 C1QTNF9BB2RNN3 333 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 SLC16A4O15374 487 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 LARGE1O95461 756 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 CLTAP09496 248 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 C1QTNF9P0C862 333 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 CXCL8P10145 99 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 NOVA1P51513 510 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 FOSBP53539 338 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 ANAPC15P60006 121 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 STRN3Q13033 797 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 PDIA5Q14554 519 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 KARSQ15046 597 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 SAFBQ15424 915 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 SEZ6Q53EL9 994 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 TCEAL6Q6IPX3 200 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 C4orf32Q8N8J7 132 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 SPIRE2Q8WWL2 714 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 TCEAL3Q969E4 200 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 CHFRQ96EP1 664 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 EDEM2Q9BV94 578 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 TIPINQ9BVW5 301 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 TMEM121BQ9BXQ6 578 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 DUSP15Q9H1R2 295 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 HPS4Q9NQG7 708 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 GKN1Q9NS71 199 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 ANKFY1Q9P2R3 1169 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 UBQLN1Q9UMX0 589 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 DNM3Q9UQ16 869 aa13.42□□□□□ -0.26
TRAPPC9-204ENST00000518723 TMEM8BA6NDV4 472 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 CLDN3O15551 220 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 RNF40O75150 1001 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 SOAT2O75908 522 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 RHOBTB1O94844 696 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 PAX3P23760 479 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 TUFMP49411 452 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 CYP4F8P98187 520 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 AMPD2Q01433 879 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 RUNX3Q13761 415 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 VEPH1Q14D04 833 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 ELF2Q15723 593 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 FBXO43Q4G163 708 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 TTC38Q5R3I4 469 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 RINT1Q6NUQ1 792 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 DSTYKQ6XUX3 929 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 C1orf186Q6ZWK4 172 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 CMTM8Q8IZV2 173 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 TMEM130Q8N3G9 435 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 IGSF22Q8N9C0 903 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 TMEM161BQ8NDZ6 487 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 SNX29Q8TEQ0 813 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 GCNAQ96QF7 691 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 TSPAN18Q96SJ8 248 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 RUSC1Q9BVN2 902 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 SLC46A2Q9BY10 475 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 EBF1Q9UH73 591 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 KCNG1Q9UIX4 513 aa13.41□□□□□ -0.26
TRAPPC9-204ENST00000518723 DSPP15924 2871 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 WDFY3Q8IZQ1 3526 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 BCLAF3A2AJT9 711 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 OTOL1A6NHN0 477 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 E9PMD0 336 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 XPOTO43592 962 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 CAVIN2O95810 425 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 MAPTP10636 758 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 ODC1P11926 461 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 ATF6P18850 670 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 DRD1P21728 446 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 GUCY2CP25092 1073 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 TRAPPC10P48553 1259 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 LILRA4P59901 499 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 SPAG1Q07617 926 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 ZNF252P-AS1Q0IIN9 211 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 DAB2IPQ5VWQ8 1189 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 HHIPQ96QV1 700 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 LPIN3Q9BQK8 851 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 SMG9Q9H0W8 520 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 KIF9Q9HAQ2 790 aa13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 KIF26AQ9ULI4 1882 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-204ENST00000518723 AKAP13Q12802 2813 aa13.4□□□□□ -0.27
TRAPPC9-204ENST00000518723 LNP1A1A4G5 178 aa13.39□□□□□ -0.27
TRAPPC9-204ENST00000518723 C4orf47A7E2U8 309 aa13.39□□□□□ -0.27
TRAPPC9-204ENST00000518723 GIPC1O14908 333 aa13.39□□□□□ -0.27
TRAPPC9-204ENST00000518723 APBB3O95704 486 aa13.39□□□□□ -0.27
TRAPPC9-204ENST00000518723 EGFP01133 1207 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms