RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 SOX1O00570 391 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-205ENST00000518196 UBASH3AP57075 661 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 NOP14P78316 857 aaKnown RBP13.92□□□□□ -0.18
PABPC1-205ENST00000518196 PDXDC1Q6P996 788 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 DPH6Q7L8W6 267 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 APTXQ7Z2E3 356 aaKnown RBP13.92□□□□□ -0.18
PABPC1-205ENST00000518196 CEP57Q86XR8 500 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 RNF168Q8IYW5 571 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-205ENST00000518196 TOP6BLQ8N6T0 577 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 FAXDC2Q96IV6 333 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 ZFRQ96KR1 1074 aaKnown RBP13.92□□□□□ -0.18
PABPC1-205ENST00000518196 NT5C1BQ96P26 610 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 CRACR2AQ9BSW2 395 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 TTPALQ9BTX7 342 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 INTS2Q9H0H0 1204 aaKnown RBP13.92□□□□□ -0.18
PABPC1-205ENST00000518196 LMAN2LQ9H0V9 348 aa13.92□□□□□ -0.18
PABPC1-205ENST00000518196 NXF1Q9UBU9 619 aaKnown RBP13.92□□□□□ -0.18
PABPC1-205ENST00000518196 LAMA2P24043 3122 aaKnown RBP13.92□□□□□ -0.18
PABPC1-205ENST00000518196 A0A1B0GTH6 734 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 H7C4K7 107 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 GRM6O15303 877 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 CBFA2T2O43439 604 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 LPXNO60711 386 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 EFEMP2O95967 443 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 URODP06132 367 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 TPM3P06753 285 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 FAM163BP0C2L3 166 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 TYMPP19971 482 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 FGFR3P22607 806 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 TKTP29401 623 aaKnown RBP13.91□□□□□ -0.18
PABPC1-205ENST00000518196 GLUD2P49448 558 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 LRMPQ12912 555 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 PTPROQ16827 1216 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 UVSSAQ2YD98 709 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 SPOPLQ6IQ16 392 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 PDE12Q6L8Q7 609 aaKnown RBP13.91□□□□□ -0.18
PABPC1-205ENST00000518196 TAS1R1Q7RTX1 841 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 TMC7Q7Z402 723 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 TMEM86AQ8N2M4 240 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 LMO3Q8TAP4 145 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 SPATA18Q8TC71 538 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 MICAL1Q8TDZ2 1067 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 LRCH3Q96II8 777 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 PCMTD1Q96MG8 357 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-205ENST00000518196 VN1R3Q9BXE9 311 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 NIF3L1Q9GZT8 377 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 ZBP1Q9H171 429 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.91□□□□□ -0.18
PABPC1-205ENST00000518196 ENTPD7Q9NQZ7 604 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 TLR9Q9NR96 1032 aa13.91□□□□□ -0.18
PABPC1-205ENST00000518196 HRO43593 1189 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 LRRN2O75325 713 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 CXCL14O95715 111 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 CYP11A1P05108 521 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 CTSAP10619 480 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 SLC9A1P19634 815 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-205ENST00000518196 PON1P27169 355 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 CA8P35219 290 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 DSG1Q02413 1049 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 CREMQ03060 361 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 YWHAHQ04917 246 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-205ENST00000518196 TRIM65Q6PJ69 517 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 ANKS3Q6ZW76 656 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 GPR65Q8IYL9 337 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 THEM5Q8N1Q8 247 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 GDPD5Q8WTR4 605 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 FAM81BQ96LP2 452 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 NAP1L5Q96NT1 182 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-205ENST00000518196 CYP3A43Q9HB55 503 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 APOBEC3GQ9HC16 384 aaKnown RBP13.9□□□□□ -0.18
PABPC1-205ENST00000518196 NGRNQ9NPE2 291 aaKnown RBP13.9□□□□□ -0.18
PABPC1-205ENST00000518196 MRPL17Q9NRX2 175 aaKnown RBP13.9□□□□□ -0.18
PABPC1-205ENST00000518196 CHST7Q9NS84 486 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 IFNKQ9P0W0 207 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 L1RE1Q9UN81 338 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 POLIQ9UNA4 740 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 TIMM13Q9Y5L4 95 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-205ENST00000518196 RANBP2P49792 3224 aaKnown RBP13.9□□□□□ -0.18
PABPC1-205ENST00000518196 VWA8A3KMH1 1905 aa13.9□□□□□ -0.18
PABPC1-205ENST00000518196 EPOPA6NHQ4 379 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 RFXAPO00287 272 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 TACC1O75410 805 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 LHX1P48742 406 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 YWHAEP62258 255 aaKnown RBP13.89□□□□□ -0.19
PABPC1-205ENST00000518196 KCNMA1Q12791 1236 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 SMC1AQ14683 1233 aaKnown RBP13.89□□□□□ -0.19
PABPC1-205ENST00000518196 NR1I3Q14994 352 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 SOWAHAQ2M3V2 549 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 WSCD1Q658N2 575 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 OVOS1Q6IE37 1185 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 ZNF280DQ6N043 979 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 SCARA5Q6ZMJ2 495 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 ADGRF2Q8IZF7 708 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 PPM1KQ8N3J5 372 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 PDCL2Q8N4E4 241 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 TTC39CQ8N584 583 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 RIN2Q8WYP3 895 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-205ENST00000518196 PIK3R5Q8WYR1 880 aa13.89□□□□□ -0.19
PABPC1-205ENST00000518196 ELMO3Q96BJ8 720 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms