RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 TUFMP49411 452 aaKnown RBP18.86■□□□□ 0.61
DDX41-217ENST00000515562 UBXN2BQ14CS0 331 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 VEPH1Q14D04 833 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 TEAD2Q15562 447 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 TPRG1Q6ZUI0 275 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 TTC9BQ8N6N2 239 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 ZSCAN18Q8TBC5 510 aaPredicted RBP18.86■□□□□ 0.61
DDX41-217ENST00000515562 E2F7Q96AV8 911 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 DHX58Q96C10 678 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 TRMT61BQ9BVS5 477 aaKnown RBP18.86■□□□□ 0.61
DDX41-217ENST00000515562 LRRC3Q9BY71 257 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 BCO2Q9BYV7 579 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 BRD9Q9H8M2 597 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 ITGA11Q9UKX5 1188 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 SLC27A5Q9Y2P5 690 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 COL4A3Q01955 1670 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 NRG2O14511 850 aaPredicted RBP18.85■□□□□ 0.61
DDX41-217ENST00000515562 PRPF6O94906 941 aaKnown RBP18.85■□□□□ 0.61
DDX41-217ENST00000515562 F13A1P00488 732 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 ITGB3P05106 788 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 GJA1P17302 382 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 PSMC3P17980 439 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 POLR2BP30876 1174 aaKnown RBP18.85■□□□□ 0.61
DDX41-217ENST00000515562 ASIC1P78348 528 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 GRM2Q14416 872 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 WSCD1Q658N2 575 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 ATL3Q6DD88 541 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 CNNM4Q6P4Q7 775 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 SHC4Q6S5L8 630 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 ZNF852Q6ZMS4 543 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 C1orf210Q8IVY1 113 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 GPD1LQ8N335 351 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 LRRC52Q8N7C0 313 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 C1orf127Q8N9H9 656 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 SPPL2BQ8TCT7 592 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 IRF7Q92985 503 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 BORCS6Q96GS4 357 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 ZSWIM3Q96MP5 696 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 NELL2Q99435 816 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 SEPT5Q99719 369 aaPredicted RBP18.85■□□□□ 0.61
DDX41-217ENST00000515562 LTB4R2Q9NPC1 389 aa18.85■□□□□ 0.61
DDX41-217ENST00000515562 MRPS17Q9Y2R5 130 aaKnown RBP18.85■□□□□ 0.61
DDX41-217ENST00000515562 A0A1W2PRU2 124 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 TULP1O00294 542 aaPredicted RBP18.84■□□□□ 0.61
DDX41-217ENST00000515562 EIF3DO15371 548 aaKnown RBP eCLIP18.84■□□□□ 0.61
DDX41-217ENST00000515562 GLULP15104 373 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 WNT7BP56706 349 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 MGAT5BQ3V5L5 792 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 FOXD4L5Q5VV16 416 aaPredicted RBP18.84■□□□□ 0.61
DDX41-217ENST00000515562 ZC3H14Q6PJT7 736 aaKnown RBP18.84■□□□□ 0.61
DDX41-217ENST00000515562 VITQ6UXI7 678 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 ASCL5Q7RTU5 278 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 DNAJB7Q7Z6W7 309 aaPredicted RBP18.84■□□□□ 0.61
DDX41-217ENST00000515562 DCP1BQ8IZD4 617 aaKnown RBP18.84■□□□□ 0.61
DDX41-217ENST00000515562 ZSWIM2Q8NEG5 633 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 NOC3LQ8WTT2 800 aaKnown RBP18.84■□□□□ 0.61
DDX41-217ENST00000515562 FOXD4L4Q8WXT5 416 aaPredicted RBP18.84■□□□□ 0.61
DDX41-217ENST00000515562 PCIF1Q9H4Z3 704 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 TRPV5Q9NQA5 729 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 HEBP1Q9NRV9 189 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 AGAP1Q9UPQ3 857 aa18.84■□□□□ 0.61
DDX41-217ENST00000515562 COL4A2P08572 1712 aa18.83■□□□□ 0.61
DDX41-217ENST00000515562 UBE4BO95155 1302 aa18.83■□□□□ 0.61
DDX41-217ENST00000515562 GOLGA8IPA6NC78 632 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 GOLGA8JA6NMD2 632 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 FAM170BA6NMN3 283 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 NCAM2O15394 837 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 SOAT2O75908 522 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 TMEM191BP0C7N4 346 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 TSPY1Q01534 308 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 FAM26FQ5R3K3 315 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 TMEM86AQ8N2M4 240 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 FAM200AQ8TCP9 573 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 SEMA4AQ9H3S1 761 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 PDE11AQ9HCR9 933 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 FAM13BQ9NYF5 915 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 PATJQ8NI35 1801 aa18.83■□□□□ 0.6
DDX41-217ENST00000515562 NUP210Q8TEM1 1887 aaPredicted RBP18.82■□□□□ 0.6
DDX41-217ENST00000515562 ZFHX2Q9C0A1 2572 aaPredicted RBP18.82■□□□□ 0.6
DDX41-217ENST00000515562 MAN2B1O00754 1011 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 HUS1O60921 280 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 LRRN2O75325 713 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 ATF6P18850 670 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 CDC25CP30307 473 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 GDI1P31150 447 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 VIPR2P41587 438 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 ME1P48163 572 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 RBP5P82980 135 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 SURF1Q15526 300 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 ARHGAP15Q53QZ3 475 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 GAREM2Q75VX8 874 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 MFSD6LQ8IWD5 586 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 PDCL2Q8N4E4 241 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 GLIS3Q8NEA6 775 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 SPATA18Q8TC71 538 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 HPS3Q969F9 1004 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 ANKRD36BP1Q96IX9 119 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 GCNAQ96QF7 691 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 C7orf25Q9BPX7 421 aa18.82■□□□□ 0.6
DDX41-217ENST00000515562 MTMR12Q9C0I1 747 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms