RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 INTS13Q9NVM9 706 aa6.07□□□□□ -1.44
SMARCA5-203ENST00000515531 PIH1D1Q9NWS0 290 aaKnown RBP6.07□□□□□ -1.44
SMARCA5-203ENST00000515531 VSX1Q9NZR4 365 aaPredicted RBP6.07□□□□□ -1.44
SMARCA5-203ENST00000515531 CTTNBP2NLQ9P2B4 639 aa6.07□□□□□ -1.44
SMARCA5-203ENST00000515531 STAP2Q9UGK3 403 aa6.07□□□□□ -1.44
SMARCA5-203ENST00000515531 PACSIN3Q9UKS6 424 aa6.07□□□□□ -1.44
SMARCA5-203ENST00000515531 A0A1W2PPL8 197 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 E7ENX8 843 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 M0QYG6 137 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 VPS4BO75351 444 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 TUSC2O75896 110 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 KIF20AO95235 890 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 KRT4P19013 534 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 HDCP19113 662 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 GPSM2P81274 684 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 TAP2Q03519 686 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 GFOD2Q3B7J2 385 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 ANO6Q4KMQ2 910 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 AMOTQ4VCS5 1084 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 HECTD2Q5U5R9 776 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 EMC10Q5UCC4 262 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 BEND2Q8NDZ0 799 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 POC1BQ8TC44 478 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 FUBP1Q96AE4 644 aaKnown RBP6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 RUNDC1Q96C34 613 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 CHFRQ96EP1 664 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 LRFN3Q9BTN0 628 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 TOR3AQ9H497 397 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 FAM204AQ9H8W3 233 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 AGAP1Q9UPQ3 857 aa6.06□□□□□ -1.44
SMARCA5-203ENST00000515531 F5H697 171 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 SOAT2O75908 522 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 SCAPQ12770 1279 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 HLXQ14774 488 aaPredicted RBP6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 PPP4R4Q6NUP7 873 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 NPNTQ6UXI9 565 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 Q6YL49 198 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 Q6ZPA2 131 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 MICALCLQ6ZW33 695 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 OVCH2Q7RTZ1 564 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 SLC44A3Q8N4M1 653 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 LRIG1Q96JA1 1093 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 B3GNT5Q9BYG0 378 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 IKZF4Q9H2S9 585 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 RAD54BQ9Y620 910 aa6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMARCA5-203ENST00000515531 GRID2IPA4D2P6 1211 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 CAPN8A6NHC0 703 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 FAM227AF5H4B4 570 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 TRIAP1O43715 76 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 ATF3P18847 181 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 ITGALP20701 1170 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 TGM1P22735 817 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 GATA3P23771 443 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 NPTX2P47972 431 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 MC2RQ01718 297 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 MPP3Q13368 585 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 FAM160B1Q5W0V3 765 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 C14orf80Q86SX3 495 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 ADGRG5Q8IZF4 528 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 LNX2Q8N448 690 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 PSD4Q8NDX1 1056 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 FAM46DQ8NEK8 389 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 SSH3Q8TE77 659 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 AIFM2Q9BRQ8 373 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 TMEM60Q9H2L4 133 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 SYBUQ9NX95 663 aa6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 EPN1Q9Y6I3 576 aaPredicted RBP6.04□□□□□ -1.44
SMARCA5-203ENST00000515531 VSTM5A8MXK1 200 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 PEX1O43933 1283 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 ESRRBO95718 433 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 CHRM3P20309 590 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 AGFG1P52594 562 aaKnown RBP6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 SEC24CP53992 1094 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 LLGL1Q15334 1064 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 SF3B3Q15393 1217 aaKnown RBP6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 TAF2Q6P1X5 1199 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 Q6ZNX1 250 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 MAEAQ7L5Y9 396 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 CELF5Q8N6W0 485 aaKnown RBP6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 LINC00476Q8WZB0 136 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 NT5C1BQ96P26 610 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 ZMAT3Q9HA38 289 aaKnown RBP6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 MRPS18AQ9NVS2 196 aaKnown RBP6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 KCTD5Q9NXV2 234 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 ETAA1Q9NY74 926 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 PLEKHM1Q9Y4G2 1056 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 DMRT1Q9Y5R6 373 aa6.03□□□□□ -1.44
SMARCA5-203ENST00000515531 MAST3O60307 1309 aa6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 SPATA31A3Q5VYP0 1347 aa6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 MYO1CO00159 1063 aa6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 PHGDHO43175 533 aaKnown RBP6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 UNC5CO95185 931 aa6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 SRGNP10124 158 aa6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 KITP10721 976 aa6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 PIM1P11309 404 aaPredicted RBP6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 NDUFV1P49821 464 aa6.02□□□□□ -1.45
SMARCA5-203ENST00000515531 LAYNQ6UX15 382 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms