RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 H0YCG3 227 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 SOAT2O75908 522 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 ODC1P11926 461 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 WEE1P30291 646 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 TNFSF9P41273 254 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 TNK2Q07912 1038 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 PTPAQ15257 358 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
LMNA-223ENST00000515459 KCTD17Q8N5Z5 321 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 SYT2Q8N9I0 419 aaPredicted RBP17.1■□□□□ 0.33
LMNA-223ENST00000515459 C12orf50Q8NA57 414 aaPredicted RBP17.1■□□□□ 0.33
LMNA-223ENST00000515459 LOXL4Q96JB6 756 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 ARRDC1-AS1Q9H2J1 176 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 TASP1Q9H6P5 420 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 THG1LQ9NWX6 298 aaKnown RBP17.1■□□□□ 0.33
LMNA-223ENST00000515459 KCND2Q9NZV8 630 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 SPAG17Q6Q759 2223 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 CHD8Q9HCK8 2581 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 AXIN1O15169 862 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 EXTL3O43909 919 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 PRAMEF12O95522 483 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 ZNF806P0C7X5 589 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 PAX3P23760 479 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 HOXC13P31276 330 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 TUFMP49411 452 aaKnown RBP17.09■□□□□ 0.33
LMNA-223ENST00000515459 GUCY2FP51841 1108 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 LILRA4P59901 499 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
LMNA-223ENST00000515459 VEPH1Q14D04 833 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 ITPRIPL2Q3MIP1 535 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 HYIQ5T013 277 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 GAB3Q8WWW8 586 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 SENP8Q96LD8 212 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 GCNAQ96QF7 691 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 TMEM209Q96SK2 561 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 RPF1Q9H9Y2 349 aaKnown RBP17.09■□□□□ 0.33
LMNA-223ENST00000515459 LARSQ9P2J5 1176 aaKnown RBP17.09■□□□□ 0.33
LMNA-223ENST00000515459 ANGPTL2Q9UKU9 493 aa17.09■□□□□ 0.33
LMNA-223ENST00000515459 CCDC163A0A0D9SF12 145 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 PPEF2O14830 753 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.32
LMNA-223ENST00000515459 RPP40O75818 363 aaKnown RBP17.08■□□□□ 0.32
LMNA-223ENST00000515459 ADRB2P07550 413 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 CDC25CP30307 473 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 MCM2P49736 904 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 LIG4P49917 911 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 NCKAP1LP55160 1127 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 CYP4F8P98187 520 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 SF3A2Q15428 464 aaKnown RBP17.08■□□□□ 0.32
LMNA-223ENST00000515459 ENOX2Q16206 610 aaKnown RBP17.08■□□□□ 0.32
LMNA-223ENST00000515459 SPATA1Q5VX52 437 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 CACNA2D4Q7Z3S7 1137 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 SEPT5Q99719 369 aaPredicted RBP17.08■□□□□ 0.32
LMNA-223ENST00000515459 LPIN3Q9BQK8 851 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 ZMYM5Q9UJ78 669 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 DENND4CQ5VZ89 1909 aa17.08■□□□□ 0.32
LMNA-223ENST00000515459 HNRNPDLO14979 420 aaKnown RBP17.07■□□□□ 0.32
LMNA-223ENST00000515459 OGTO15294 1046 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 FAM189A1O60320 539 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 ATG13O75143 517 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 EPN2O95208 641 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 RAP1GAPP47736 663 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 CCDC6Q16204 474 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 TAF12Q16514 161 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 MGAT5BQ3V5L5 792 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 SLC39A12Q504Y0 691 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 TMEM196Q5HYL7 178 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 CD302Q8IX05 232 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 OR10T2Q8NGX3 314 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 KCNN1Q92952 543 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 FAM212AQ96EL1 285 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 PLIN2Q99541 437 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.07■□□□□ 0.32
LMNA-223ENST00000515459 GKN1Q9NS71 199 aa17.07■□□□□ 0.32
LMNA-223ENST00000515459 EML5Q05BV3 1969 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 ZNF638Q14966 1978 aaKnown RBP17.06■□□□□ 0.32
LMNA-223ENST00000515459 TCHHQ07283 1943 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 ZFHX4Q86UP3 3567 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 TM4SF5O14894 197 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 CYP11A1P05108 521 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 PLA2G4BP0C869 781 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 ATF6P18850 670 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 PMLP29590 882 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 PXNP49023 591 aaPredicted RBP17.06■□□□□ 0.32
LMNA-223ENST00000515459 GRSF1Q12849 480 aaKnown RBP eCLIP17.06■□□□□ 0.32
LMNA-223ENST00000515459 N4BP2L1Q5TBK1 243 aaPredicted RBP17.06■□□□□ 0.32
LMNA-223ENST00000515459 C9orf57Q5W0N0 161 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 JADE1Q6IE81 842 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 PKN3Q6P5Z2 889 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 KBTBD6Q86V97 674 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 CMTM8Q8IZV2 173 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 CDK5RAP3Q96JB5 506 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 ZSCAN31Q96LW9 406 aaPredicted RBP17.06■□□□□ 0.32
LMNA-223ENST00000515459 FAM83CQ9BQN1 747 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 SLC46A2Q9BY10 475 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 SMG9Q9H0W8 520 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms