RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 LMBRD2Q68DH5 695 aaPredicted RBP13.75□□□□□ -0.21
CLCN3-210ENST00000515420 TRAPPC11Q7Z392 1133 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 GRASPQ7Z6J2 395 aaPredicted RBP13.75□□□□□ -0.21
CLCN3-210ENST00000515420 ELMOD1Q8N336 334 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 RDH13Q8NBN7 331 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 LEMD2Q8NC56 503 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 ZCWPW1Q9H0M4 648 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 DNMT3BQ9UBC3 853 aaKnown RBP13.75□□□□□ -0.21
CLCN3-210ENST00000515420 POLIQ9UNA4 740 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 MTMR11A4FU01 709 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 MICAL2O94851 1124 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 STAU1O95793 577 aaKnown RBP13.74□□□□□ -0.21
CLCN3-210ENST00000515420 FAM163BP0C2L3 166 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 LAMP2P13473 410 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 LHX1P48742 406 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 BFSP1Q12934 665 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 PNOCQ13519 176 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 CENPPQ6IPU0 288 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 TRIM67Q6ZTA4 783 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 GET4Q7L5D6 327 aaPredicted RBP13.74□□□□□ -0.21
CLCN3-210ENST00000515420 LIMS2Q7Z4I7 341 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 BMP8AQ7Z5Y6 402 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 DCP1BQ8IZD4 617 aaKnown RBP13.74□□□□□ -0.21
CLCN3-210ENST00000515420 PDCL2Q8N4E4 241 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 OR10T2Q8NGX3 314 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 TMC2Q8TDI7 906 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 PARD3BQ8TEW8 1205 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 HPDLQ96IR7 371 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 MYADMQ96S97 322 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 RTP3Q9BQQ7 232 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 ACBD6Q9BR61 282 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 LRFN3Q9BTN0 628 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 GZF1Q9H116 711 aaPredicted RBP13.74□□□□□ -0.21
CLCN3-210ENST00000515420 LIMD1Q9UGP4 676 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 CDH7Q9ULB5 785 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 L1RE1Q9UN81 338 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 FRMD4BQ9Y2L6 1034 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 YIPF1Q9Y548 306 aa13.74□□□□□ -0.21
CLCN3-210ENST00000515420 ZNF197O14709 1029 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 GABRDO14764 452 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 IKBKBO14920 756 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 VNN2O95498 520 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 RHOP08100 348 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 OR4Q2P0C623 313 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 RPL13P26373 211 aaKnown RBP13.73□□□□□ -0.21
CLCN3-210ENST00000515420 PCSK1P29120 753 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 ATICP31939 592 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 EPHA5P54756 1037 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 MYL7Q01449 175 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 TSPY1Q01534 308 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 EDRF1Q3B7T1 1238 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 ZCWPW2Q504Y3 356 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 ZNF658Q5TYW1 1059 aaPredicted RBP13.73□□□□□ -0.21
CLCN3-210ENST00000515420 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 SPPL2BQ8TCT7 592 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 SMARCE1Q969G3 411 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 CCDC127Q96BQ5 260 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 ZNF512Q96ME7 567 aaPredicted RBP13.73□□□□□ -0.21
CLCN3-210ENST00000515420 KCNK12Q9HB15 430 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 GDE1Q9NZC3 331 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 ASB3Q9Y575 518 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 SNX9Q9Y5X1 595 aa13.73□□□□□ -0.21
CLCN3-210ENST00000515420 ANHXE9PGG2 379 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 TULP1O00294 542 aaPredicted RBP13.72□□□□□ -0.21
CLCN3-210ENST00000515420 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
CLCN3-210ENST00000515420 ASGR2P07307 311 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 NR2F2P24468 414 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 ALDH1A3P47895 512 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 TUFMP49411 452 aaKnown RBP13.72□□□□□ -0.21
CLCN3-210ENST00000515420 EPHB3P54753 998 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 MCCD1P59942 119 aaPredicted RBP13.72□□□□□ -0.21
CLCN3-210ENST00000515420 NTHL1P78549 312 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 TWF1Q12792 350 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 TDGQ13569 410 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 NFE2Q16621 373 aaPredicted RBP13.72□□□□□ -0.21
CLCN3-210ENST00000515420 SOWAHAQ2M3V2 549 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 SLC39A12Q504Y0 691 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 ADGRF2Q8IZF7 708 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 ZNF516Q92618 1163 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 FGF13Q92913 245 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 SYAP1Q96A49 352 aaPredicted RBP13.72□□□□□ -0.21
CLCN3-210ENST00000515420 FAM84AQ96KN4 292 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 TMEM209Q96SK2 561 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 MKNK1Q9BUB5 465 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 VRTNQ9H8Y1 702 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 HCFC1R1Q9NWW0 138 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 CEP72Q9P209 647 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 MRPS23Q9Y3D9 190 aaKnown RBP13.72□□□□□ -0.21
CLCN3-210ENST00000515420 PCDHA5Q9Y5H7 936 aa13.72□□□□□ -0.21
CLCN3-210ENST00000515420 LRRIQ3A6PVS8 624 aaPredicted RBP13.71□□□□□ -0.21
CLCN3-210ENST00000515420 TACC1O75410 805 aa13.71□□□□□ -0.21
CLCN3-210ENST00000515420 FGF19O95750 216 aa13.71□□□□□ -0.21
CLCN3-210ENST00000515420 PPP1R2P41236 205 aa13.71□□□□□ -0.21
CLCN3-210ENST00000515420 CASP4P49662 377 aa13.71□□□□□ -0.21
CLCN3-210ENST00000515420 DUSP4Q13115 394 aa13.71□□□□□ -0.21
CLCN3-210ENST00000515420 TRPC3Q13507 836 aa13.71□□□□□ -0.21
CLCN3-210ENST00000515420 HTR4Q13639 388 aa13.71□□□□□ -0.21
CLCN3-210ENST00000515420 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.21
CLCN3-210ENST00000515420 PRSS36Q5K4E3 855 aa13.71□□□□□ -0.21
CLCN3-210ENST00000515420 CYP4A22Q5TCH4 519 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms