RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 UHRF1Q96T88 793 aaPredicted RBP14.98□□□□□ -0.01
USP46-209ENST00000514536 RTP3Q9BQQ7 232 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 SRRTQ9BXP5 876 aaKnown RBP14.98□□□□□ -0.01
USP46-209ENST00000514536 CLSTN1O94985 981 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 C8AP07357 584 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 ATF2P15336 505 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 ATICP31939 592 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 ADCY1Q08828 1119 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 PPM1LQ5SGD2 360 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 ATAT1Q5SQI0 421 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 TCERG1LQ5VWI1 586 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 TPGS2Q68CL5 300 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 FOXR2Q6PJQ5 311 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 C15orf39Q6ZRI6 1047 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 GPR149Q86SP6 731 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 TMEM86AQ8N2M4 240 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 SLC7A14Q8TBB6 771 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 SYAP1Q96A49 352 aaPredicted RBP14.98□□□□□ -0.01
USP46-209ENST00000514536 XYLT2Q9H1B5 865 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 ZDHHC7Q9NXF8 308 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 NXF1Q9UBU9 619 aaKnown RBP14.98□□□□□ -0.01
USP46-209ENST00000514536 ARMCX3Q9UH62 379 aaPredicted RBP14.98□□□□□ -0.01
USP46-209ENST00000514536 AFF4Q9UHB7 1163 aaKnown RBP14.98□□□□□ -0.01
USP46-209ENST00000514536 RWDD2AQ9UIY3 292 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 PRRG1O14668 218 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 SEC24AO95486 1093 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 STAU1O95793 577 aaKnown RBP14.97□□□□□ -0.01
USP46-209ENST00000514536 HLA-DRAP01903 254 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 GTF2H1P32780 548 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 CDR1P51861 262 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 TNNC1P63316 161 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 GPR17Q13304 367 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 CBX2Q14781 532 aaPredicted RBP14.97□□□□□ -0.01
USP46-209ENST00000514536 SGSM1Q2NKQ1 1148 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 UVSSAQ2YD98 709 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 DPCR1Q3MIW9 517 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 CCDC40Q4G0X9 1142 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 DCAF17Q5H9S7 520 aaPredicted RBP14.97□□□□□ -0.01
USP46-209ENST00000514536 CCDC149Q6ZUS6 474 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 DPH6Q7L8W6 267 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 LIMS2Q7Z4I7 341 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 OSTM1Q86WC4 334 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 ADGRF2Q8IZF7 708 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 CMASQ8NFW8 434 aaPredicted RBP14.97□□□□□ -0.01
USP46-209ENST00000514536 RIPOR3Q96MK2 946 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 PGLYRP2Q96PD5 576 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 MED15Q96RN5 788 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 PRKD2Q9BZL6 878 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 ZCWPW1Q9H0M4 648 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 CYP4F11Q9HBI6 524 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 METTL14Q9HCE5 456 aaKnown RBP14.97□□□□□ -0.01
USP46-209ENST00000514536 TMEM8AQ9HCN3 771 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 DDX43Q9NXZ2 648 aaKnown RBP14.97□□□□□ -0.01
USP46-209ENST00000514536 POLIQ9UNA4 740 aa14.97□□□□□ -0.01
USP46-209ENST00000514536 STX10O60499 249 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 ACAT1P24752 427 aaKnown RBP14.96□□□□□ -0.01
USP46-209ENST00000514536 PIK3CAP42336 1068 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 MTHFRP42898 656 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 LHX1P48742 406 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 ZNF699Q32M78 642 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 ZNF667Q5HYK9 610 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 KRT39Q6A163 491 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 RBM43Q6ZSC3 357 aaKnown RBP14.96□□□□□ -0.01
USP46-209ENST00000514536 FRMD5Q7Z6J6 570 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 LRRTM3Q86VH5 581 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 TCEAL8Q8IYN2 117 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 KBTBD7Q8WVZ9 684 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 SMG7Q92540 1137 aaKnown RBP14.96□□□□□ -0.01
USP46-209ENST00000514536 ZNF707Q96C28 371 aaPredicted RBP14.96□□□□□ -0.01
USP46-209ENST00000514536 PIDD1Q9HB75 910 aa14.96□□□□□ -0.01
USP46-209ENST00000514536 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.96□□□□□ -0.01
USP46-209ENST00000514536 GABRDO14764 452 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 CCL16O15467 120 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 HCRTO43612 131 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 VNN2O95498 520 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 FGFR1OPO95684 399 aaKnown RBP14.95□□□□□ -0.02
USP46-209ENST00000514536 PDGFRBP09619 1106 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 MYL7Q01449 175 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 SLC39A12Q504Y0 691 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 CCDC183Q5T5S1 534 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 ATAD1Q8NBU5 361 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 SPATA18Q8TC71 538 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 TAS1R2Q8TE23 839 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 NECTIN4Q96NY8 510 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 ACBD6Q9BR61 282 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 MRPL45Q9BRJ2 306 aaKnown RBP14.95□□□□□ -0.02
USP46-209ENST00000514536 PI4K2AQ9BTU6 479 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 POMKQ9H5K3 350 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 VRTNQ9H8Y1 702 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 MAFFQ9ULX9 164 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 PLXNA3P51805 1871 aa14.95□□□□□ -0.02
USP46-209ENST00000514536 MTMR11A4FU01 709 aa14.94□□□□□ -0.02
USP46-209ENST00000514536 LRRN2O75325 713 aa14.94□□□□□ -0.02
USP46-209ENST00000514536 GNA14O95837 355 aa14.94□□□□□ -0.02
USP46-209ENST00000514536 ASS1P00966 412 aaKnown RBP14.94□□□□□ -0.02
USP46-209ENST00000514536 HNRNPA1P09651 372 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP46-209ENST00000514536 FAM163BP0C2L3 166 aa14.94□□□□□ -0.02
USP46-209ENST00000514536 WARSP23381 471 aaKnown RBP14.94□□□□□ -0.02
USP46-209ENST00000514536 LMO2P25791 158 aa14.94□□□□□ -0.02
USP46-209ENST00000514536 HOXA9P31269 272 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms