RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 RNF216Q9NWF9 866 aaPredicted RBP21.02■□□□□ 0.96
SSBP2-218ENST00000514493 LRFN2Q9ULH4 789 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 BARX2Q9UMQ3 279 aaPredicted RBP21.02■□□□□ 0.96
SSBP2-218ENST00000514493 HOXA2O43364 376 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 CALCAP01258 141 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 IKBKEQ14164 716 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 MFSD5Q6N075 450 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 LIMS2Q7Z4I7 341 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 PALB2Q86YC2 1186 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 WHAMMQ8TF30 809 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 PACSIN1Q9BY11 444 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 KANSL3Q9P2N6 904 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 HMGXB4Q9UGU5 601 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 INTUQ9ULD6 942 aa21.02■□□□□ 0.96
SSBP2-218ENST00000514493 MYH10P35580 1976 aa21.02■□□□□ 0.95
SSBP2-218ENST00000514493 PTPRSQ13332 1948 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 PAEPP09466 180 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 TERF1P54274 439 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 RAD23BP54727 409 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 DSC1Q08554 894 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 SOWAHAQ2M3V2 549 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 ZNF394Q53GI3 561 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 ABI1Q8IZP0 508 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 RNF10Q8N5U6 811 aaKnown RBP21.01■□□□□ 0.95
SSBP2-218ENST00000514493 RSPH1Q8WYR4 309 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 PAAF1Q9BRP4 392 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 TBC1D13Q9NVG8 400 aa21.01■□□□□ 0.95
SSBP2-218ENST00000514493 CTAGE9A4FU28 777 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 BTNL10A8MVZ5 291 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 RIOK3O14730 519 aaKnown RBP21■□□□□ 0.95
SSBP2-218ENST00000514493 THAP12O43422 761 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 TACC1O75410 805 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 PFKMP08237 780 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 CSF2RAP15509 400 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 TMEM199Q8N511 208 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 TOP6BLQ8N6T0 577 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 C3orf58Q8NDZ4 430 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 TRIM58Q8NG06 486 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 TWNKQ96RR1 684 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 MRPL45Q9BRJ2 306 aaKnown RBP21■□□□□ 0.95
SSBP2-218ENST00000514493 ELOVL4Q9GZR5 314 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 L2HGDHQ9H9P8 463 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 COL4A6Q14031 1691 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 H2AFZP0C0S5 128 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 AARSP49588 968 aaKnown RBP eCLIP21■□□□□ 0.95
SSBP2-218ENST00000514493 NDST1P52848 882 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 H2AFVQ71UI9 128 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 SLC4A11Q8NBS3 891 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 APPL2Q8NEU8 664 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 KBTBD7Q8WVZ9 684 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 PCDHB18PQ96TA0 734 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 NAPGQ99747 312 aaPredicted RBP21■□□□□ 0.95
SSBP2-218ENST00000514493 L1RE1Q9UN81 338 aa21■□□□□ 0.95
SSBP2-218ENST00000514493 B4GALT3O60512 393 aa20.99■□□□□ 0.95
SSBP2-218ENST00000514493 HUS1O60921 280 aa20.99■□□□□ 0.95
SSBP2-218ENST00000514493 DPH6Q7L8W6 267 aa20.99■□□□□ 0.95
SSBP2-218ENST00000514493 TMEM176AQ96HP8 235 aa20.99■□□□□ 0.95
SSBP2-218ENST00000514493 CASD1Q96PB1 797 aa20.99■□□□□ 0.95
SSBP2-218ENST00000514493 NOX5Q96PH1 765 aa20.99■□□□□ 0.95
SSBP2-218ENST00000514493 ALS2CR12Q96Q35 445 aa20.99■□□□□ 0.95
SSBP2-218ENST00000514493 PUF60Q9UHX1 559 aaKnown RBP20.99■□□□□ 0.95
SSBP2-218ENST00000514493 CAPN6Q9Y6Q1 641 aa20.99■□□□□ 0.95
SSBP2-218ENST00000514493 ABHD14A-ACY1A0A1B0GW23 586 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 URI1O94763 535 aaPredicted RBP20.98■□□□□ 0.95
SSBP2-218ENST00000514493 DDHD2O94830 711 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 GZMAP12544 262 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 PAX3P23760 479 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 BRD2P25440 801 aaKnown RBP20.98■□□□□ 0.95
SSBP2-218ENST00000514493 RNASELQ05823 741 aaKnown RBP20.98■□□□□ 0.95
SSBP2-218ENST00000514493 TRIM72Q6ZMU5 477 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.98■□□□□ 0.951e-8■■■■□ 21.4
SSBP2-218ENST00000514493 UNC93AQ86WB7 457 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 ZNF280BQ86YH2 543 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 COLGALT2Q8IYK4 626 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 ADGRF2Q8IZF7 708 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 ZNF606Q8WXB4 792 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 DPF3Q92784 378 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 NT5C1AQ9BXI3 368 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 TAS2R14Q9NYV8 317 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 SALL4Q9UJQ4 1053 aa20.98■□□□□ 0.95
SSBP2-218ENST00000514493 CYB561D2O14569 222 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 B3GAT3O94766 335 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 MOCS3O95396 460 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 IGFBP6P24592 240 aaPredicted RBP20.97■□□□□ 0.95
SSBP2-218ENST00000514493 GATMP50440 423 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 ORC1Q13415 861 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 CLEC16AQ2KHT3 1053 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 PDCL2Q8N4E4 241 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 MYRIPQ8NFW9 859 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 RABGGTAQ92696 567 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 SENP8Q96LD8 212 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 ZSWIM1Q9BR11 485 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 MRPL9Q9BYD2 267 aaKnown RBP20.97■□□□□ 0.95
SSBP2-218ENST00000514493 TMCO5BA8MYB1 307 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 TMEM189-UBE2V1I3L0A0 370 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 EFCAB14O75071 495 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 CYP1A1P04798 512 aaPredicted RBP20.97■□□□□ 0.95
SSBP2-218ENST00000514493 FAM163BP0C2L3 166 aa20.97■□□□□ 0.95
SSBP2-218ENST00000514493 WARSP23381 471 aaKnown RBP20.97■□□□□ 0.95
SSBP2-218ENST00000514493 GALCP54803 685 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms