RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MAGEB18Q96M61 343 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 TRAPPC9Q96Q05 1148 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SH3GL3Q99963 347 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 DDX47Q9H0S4 455 aaKnown RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SEMA4AQ9H3S1 761 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 FAM207AQ9NSI2 230 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 RRN3P2A6NIE6 340 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 GAS2O43903 313 aaKnown RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SNUPNO95149 360 aaKnown RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 MMEP08473 750 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 MYCLP12524 364 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 ARHGAP1Q07960 439 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 PPP2R5CQ13362 524 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 PPP2R5EQ16537 467 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 FSCN1Q16658 493 aaKnown RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 UBE2Q1Q7Z7E8 422 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 KBTBD2Q8IY47 623 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SLC43A3Q8NBI5 491 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 FAM13CQ8NE31 585 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 TRPV1Q8NER1 839 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 FBXO25Q8TCJ0 367 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 TBCKQ8TEA7 893 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SEPT1Q8WYJ6 367 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SKA1Q96BD8 255 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 GLT1D1Q96MS3 346 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SMARCAD1Q9H4L7 1026 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 UBE4BO95155 1302 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 IGLV3-22A0A075B6J6 115 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 TCRBV5S1A1TA0A578 114 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 WDR64B1ANS9 1081 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 PDXKO00764 312 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 AKAP3O75969 853 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 RNF8O76064 485 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 PSAPP07602 524 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 KCNA2P16389 499 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 SP100P23497 879 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 HOXA13P31271 388 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 GBP1P32455 592 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 RFC2P35250 354 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 MRPS9P82933 396 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 PTK6Q13882 451 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 LRRC41Q15345 812 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 ODR4Q5SWX8 454 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 LRCH2Q5VUJ6 765 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 TTC30AQ86WT1 665 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 C12orf56Q8IXR9 622 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 ZNF398Q8TD17 642 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 STK32AQ8WU08 396 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 SNRNP27Q8WVK2 155 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 PRMT1Q99873 361 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 TRIM51Q9BSJ1 452 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 PIDD1Q9HB75 910 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 KRT82Q9NSB4 513 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 NOP53Q9NZM5 478 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 SLC9A2Q9UBY0 812 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 DDX25Q9UHL0 483 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 SCN10AQ9Y5Y9 1956 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 LYPLA2O95372 231 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 FERP16591 822 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 SMPD1P17405 629 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 SLC9A1P19634 815 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 CCND3P30281 292 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 CDK18Q07002 472 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 UBE2SQ16763 222 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 C6orf118Q5T5N4 469 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 CCSAPQ6IQ19 270 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 RNF111Q6ZNA4 994 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 TRMT10CQ7L0Y3 403 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 RFFLQ8WZ73 363 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 JPH1Q9HDC5 661 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 OSGEPQ9NPF4 335 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 PPANQ9NQ55 473 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 TMA7Q9Y2S6 64 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 KDM3AQ9Y4C1 1321 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 TCRBV7S2A1N4TA0A589 114 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 NOP56O00567 594 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 MAPK13O15264 365 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 SORBS3O60504 671 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 UBA1P22314 1058 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 CNGA1P29973 690 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 PAFAH1B1P43034 410 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 RAP1GDS1P52306 607 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 CAP1Q01518 475 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 PDAP1Q13442 181 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 SLC29A2Q14542 456 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 CLUL1Q15846 466 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 EPC2Q52LR7 807 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 MFSD4BQ5TF39 518 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 ADGRG6Q86SQ4 1221 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 FBXO16Q8IX29 292 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 EPS8L3Q8TE67 593 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 ATP6V0A1Q93050 837 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 NAF1Q96HR8 494 aaKnown RBP7.86□□□□□ -1.15
CLIP1-205ENST00000514271 ZNF577Q9BSK1 485 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 GOLPH3Q9H4A6 298 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 KIF9Q9HAQ2 790 aa7.86□□□□□ -1.15
CLIP1-205ENST00000514271 GREB1Q4ZG55 1949 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 IGKV6D-21A0A0A0MT36 114 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 GOLGA6L7A0A1B0GV03 622 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 PES1O00541 588 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms