RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 SREBF1P36956 1147 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 CDK17Q00537 523 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 STX3Q13277 289 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 TRIP10Q15642 601 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 TAF1BQ53T94 588 aaPredicted RBP13.7□□□□□ -0.22
PRDM16-208ENST00000514189 TMEM154Q6P9G4 183 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 LRRC55Q6ZSA7 311 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 TMA16Q96EY4 203 aaKnown RBP13.7□□□□□ -0.22
PRDM16-208ENST00000514189 RIT2Q99578 217 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 TUBB6Q9BUF5 446 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 FSD1LQ9BXM9 530 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 COL5A2P05997 1499 aaPredicted RBP13.7□□□□□ -0.22
PRDM16-208ENST00000514189 SLC1A1P43005 524 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 RAP1GAPP47736 663 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 CLCN3P51790 818 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 FUT2Q10981 343 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 ANGEL2Q5VTE6 544 aaKnown RBP13.7□□□□□ -0.22
PRDM16-208ENST00000514189 MTDHQ86UE4 582 aaKnown RBP13.7□□□□□ -0.22
PRDM16-208ENST00000514189 ICA1LQ8NDH6 482 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 ACTL9Q8TC94 416 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.7□□□□□ -0.225e-8■■■■■ 65.3
PRDM16-208ENST00000514189 MOV10L1Q9BXT6 1211 aaKnown RBP13.7□□□□□ -0.22
PRDM16-208ENST00000514189 AP5M1Q9H0R1 490 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 DEFB129Q9H1M3 183 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 KRT82Q9NSB4 513 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 KLK14Q9P0G3 267 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 CPSF3Q9UKF6 684 aaKnown RBP13.7□□□□□ -0.22
PRDM16-208ENST00000514189 OPLAHO14841 1288 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 CCNA1P78396 465 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 YWHAHQ04917 246 aaPredicted RBP13.69□□□□□ -0.22
PRDM16-208ENST00000514189 PPP3CAQ08209 521 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 ST13P4Q8IZP2 240 aaPredicted RBP13.69□□□□□ -0.22
PRDM16-208ENST00000514189 SLC25A41Q8N5S1 370 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 BCAS3Q9H6U6 928 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 ELP3Q9H9T3 547 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 BAG5Q9UL15 447 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 OSBPP22059 807 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 OTUD4Q01804 1114 aaKnown RBP13.69□□□□□ -0.22
PRDM16-208ENST00000514189 TRIM72Q6ZMU5 477 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 ABI1Q8IZP0 508 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 FAM151AQ8WW52 585 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 CYP26B1Q9NR63 512 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 EIF3DO15371 548 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRDM16-208ENST00000514189 TPST1O60507 370 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 MT-CO1P00395 513 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 ITGB3P05106 788 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 CTSHP09668 335 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 CDH8P55286 799 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 CHI3L2Q15782 390 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 RSBN1LQ6PCB5 846 aaPredicted RBP13.69□□□□□ -0.22
PRDM16-208ENST00000514189 BAP1Q92560 729 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 DNAJC19Q96DA6 116 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 VPS39Q96JC1 886 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 KNL1Q8NG31 2342 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 ZWINTO95229 277 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 PGK2P07205 417 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 ATP6V1B1P15313 513 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 MYL6P60660 151 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 PHEXP78562 749 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 AMPD2Q01433 879 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 SATB1Q01826 763 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 MORF4L2Q15014 288 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 NLRP9Q7RTR0 991 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 FBXO36Q8NEA4 188 aa13.69□□□□□ -0.22
PRDM16-208ENST00000514189 DFFAO00273 331 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 APOL1O14791 398 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 CBX6O95503 412 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 BIRC2Q13490 618 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 DCAF6Q58WW2 860 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 SLC10A5Q5PT55 438 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 GRAMD1AQ96CP6 724 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 MANSC1Q9H8J5 431 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 SDK1Q7Z5N4 2213 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 MYO9BQ13459 2157 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 FMN2Q9NZ56 1722 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 UBA6A0AVT1 1052 aaPredicted RBP13.68□□□□□ -0.22
PRDM16-208ENST00000514189 SUPT3HO75486 399 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 NPTXRO95502 500 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 ETS1P14921 441 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 SMARCA1P28370 1054 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 RARRES1P49788 294 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 PTENP60484 403 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 RCN1Q15293 331 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 NOP9Q86U38 636 aaKnown RBP13.68□□□□□ -0.22
PRDM16-208ENST00000514189 SEPT1Q8WYJ6 367 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 CAVIN3Q969G5 261 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 MTMR9Q96QG7 549 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 RANBP17Q9H2T7 1088 aaKnown RBP13.68□□□□□ -0.22
PRDM16-208ENST00000514189 IL1RL2Q9HB29 575 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 ARMCX1Q9P291 453 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 AURKCQ9UQB9 309 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 V9GYQ6 96 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 MYL3P08590 195 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 ESRRGP62508 458 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 AP2B1P63010 937 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 KLC1Q07866 573 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 CUL2Q13617 745 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 HIC1Q14526 733 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms