RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 CENPPQ6IPU0 288 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 WASF1Q92558 559 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 MTMR9Q96QG7 549 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 FAM83CQ9BQN1 747 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 TCHPQ9BT92 498 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 TMEM134Q9H6X4 195 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 PTPRHQ9HD43 1115 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 HSFX1Q9UBD0 423 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
PTPN20-229ENST00000513756 CYP46A1Q9Y6A2 500 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 CITO14578 2027 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 H0Y626 953 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 MED24O75448 989 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 TRIM16O95361 564 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 RPA1P27694 616 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 TUFMP49411 452 aaKnown RBP13.13□□□□□ -0.31
PTPN20-229ENST00000513756 GALK1P51570 392 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 NR5A1Q13285 461 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 TAF12Q16514 161 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 ARMCX5Q6P1M9 558 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 CC2D1AQ6P1N0 951 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-229ENST00000513756 P2RY13Q9BPV8 354 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 NUSAP1Q9BXS6 441 aaKnown RBP13.13□□□□□ -0.31
PTPN20-229ENST00000513756 CRISPLD1Q9H336 500 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 EBF3Q9H4W6 596 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 HPS4Q9NQG7 708 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 POLR3BQ9NW08 1133 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-229ENST00000513756 EVLQ9UI08 416 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-229ENST00000513756 SMG1Q96Q15 3661 aaKnown RBP13.13□□□□□ -0.31
PTPN20-229ENST00000513756 FREM2Q5SZK8 3169 aa13.13□□□□□ -0.31
PTPN20-229ENST00000513756 MTMR11A4FU01 709 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 CCDC169A6NNP5 214 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 MUTP22033 750 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 DDX6P26196 483 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTPN20-229ENST00000513756 AVPR1AP37288 418 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 IRX4P78413 519 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 CYP4F8P98187 520 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 BFSP1Q12934 665 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 PDGFRLQ15198 375 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 OVOS1Q6IE37 1185 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 MPZL3Q6UWV2 235 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 DSTYKQ6XUX3 929 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 CMTM8Q8IZV2 173 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 ATAD1Q8NBU5 361 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
PTPN20-229ENST00000513756 KIF9Q9HAQ2 790 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 ANKFY1Q9P2R3 1169 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 KLK13Q9UKR3 277 aa13.12□□□□□ -0.31
PTPN20-229ENST00000513756 TIMM13Q9Y5L4 95 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-229ENST00000513756 THADAQ6YHU6 1953 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 FAM221BA6H8Z2 402 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 MEFVO15553 781 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-229ENST00000513756 PROZP22891 400 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 LRPAP1P30533 357 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 DHPSP49366 369 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-229ENST00000513756 TRIM68Q6AZZ1 485 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 PROSER1Q86XN7 944 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 ABCA7Q8IZY2 2146 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 TSTD1Q8NFU3 115 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 PIGKQ92643 395 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 TNFRSF25Q93038 417 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
PTPN20-229ENST00000513756 SLC46A2Q9BY10 475 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
PTPN20-229ENST00000513756 POLD4Q9HCU8 107 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 TUBGCP4Q9UGJ1 667 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 INVSQ9Y283 1065 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
PTPN20-229ENST00000513756 ADAMTS20P59510 1910 aa13.11□□□□□ -0.31
PTPN20-229ENST00000513756 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
PTPN20-229ENST00000513756 PCNX2A6NKB5 2137 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 LOC400499M0QZD8 3231 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 OTOL1A6NHN0 477 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-229ENST00000513756 UPK3BL1B0FP48 263 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 PATE3B3GLJ2 98 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 UPK3BL2E5RIL1 263 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 SOAT2O75908 522 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 REC8O95072 547 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
PTPN20-229ENST00000513756 TYMPP19971 482 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 DPP6P42658 865 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 NPTX2P47972 431 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 AARSP49588 968 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTPN20-229ENST00000513756 PEX3P56589 373 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 SIM1P81133 766 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-229ENST00000513756 SCRN1Q12765 414 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 PSMD2Q13200 908 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 DMP1Q13316 513 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-229ENST00000513756 SLC10A6Q3KNW5 377 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 SOWAHCQ53LP3 525 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-229ENST00000513756 TRIM61Q5EBN2 209 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 HAUS3Q68CZ6 603 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 CPA6Q8N4T0 437 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms