RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 UNC93AQ86WB7 457 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 WDTC1Q8N5D0 677 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 SLC4A11Q8NBS3 891 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 CPA5Q8WXQ8 436 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 KIF12Q96FN5 646 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 TMEM176AQ96HP8 235 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 RHOXF2Q9BQY4 288 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
RNF4-220ENST00000513578 LRRC1Q9BTT6 524 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 EIF2AQ9BY44 585 aaKnown RBP8.9□□□□□ -0.98
RNF4-220ENST00000513578 SDCBP2Q9H190 292 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 GOLPH3Q9H4A6 298 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 XPNPEP3Q9NQH7 507 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 RBM12Q9NTZ6 932 aaKnown RBP8.9□□□□□ -0.98
RNF4-220ENST00000513578 PARVAQ9NVD7 372 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 RNF186Q9NXI6 227 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 WDR35Q9P2L0 1181 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 STRIP2Q9ULQ0 834 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 BARX2Q9UMQ3 279 aaPredicted RBP8.9□□□□□ -0.98
RNF4-220ENST00000513578 POLIQ9UNA4 740 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 CEP83Q9Y592 693 aa8.9□□□□□ -0.98
RNF4-220ENST00000513578 MYO1FO00160 1098 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 MAP2K7O14733 419 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 RECQL4O94761 1208 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 CALCAP01258 141 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 ASGR1P07306 291 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 CFHP08603 1231 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 PRKAR2AP13861 404 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 CD58P19256 250 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 BRD2P25440 801 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 CCND3P30281 292 aaPredicted RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 LRPAP1P30533 357 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 GABRB2P47870 512 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 LBX1P52954 281 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 CAP1Q01518 475 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 TRIM32Q13049 653 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 PTK7Q13308 1070 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 MAMLD1Q13495 774 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 MESDQ14696 234 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 ARHGEF6Q15052 776 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 LONRF2Q1L5Z9 754 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 PPP1R15BQ5SWA1 713 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 DCAF12L1Q5VU92 463 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 C9orf57Q5W0N0 161 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 GDF6Q6KF10 455 aaPredicted RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 C8orf74Q6P047 294 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 CXCL17Q6UXB2 119 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 DPH6Q7L8W6 267 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 MRPL10Q7Z7H8 261 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 SMG8Q8ND04 991 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 FEZF2Q8TBJ5 459 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 TFAP2BQ92481 460 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 RNPC3Q96LT9 517 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 ZMAT2Q96NC0 199 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 PSMB7Q99436 277 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 PLVAPQ9BX97 442 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 FUT8Q9BYC5 575 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 SEZ6LQ9BYH1 1024 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 TRIM6Q9C030 488 aaPredicted RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 SENP6Q9GZR1 1112 aaPredicted RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 ELOVL4Q9GZR5 314 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 DNAI2Q9GZS0 605 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 GDF3Q9NR23 364 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.89□□□□□ -0.99
RNF4-220ENST00000513578 GDAP2Q9NXN4 497 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 EHD2Q9NZN4 543 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 OGFRQ9NZT2 677 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 STIM2Q9P246 746 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 NXF1Q9UBU9 619 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 IP6K2Q9UHH9 426 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 DDX20Q9UHI6 824 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 ANAPC7Q9UJX3 599 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 L1RE1Q9UN81 338 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 PIN4Q9Y237 131 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 NOC2LQ9Y3T9 749 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 CDY2AQ9Y6F7 541 aa8.89□□□□□ -0.99
RNF4-220ENST00000513578 TDRD15B5MCY1 1934 aaKnown RBP8.89□□□□□ -0.99
RNF4-220ENST00000513578 GRIN2DO15399 1336 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 SMIM28A0A1B0GU29 152 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 TMEM191CA6NGB0 347 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 MOXD2PA6NHM9 499 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 GPR182O15218 404 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 TLR3O15455 904 aaKnown RBP8.88□□□□□ -0.99
RNF4-220ENST00000513578 ATMINO43313 823 aaPredicted RBP8.88□□□□□ -0.99
RNF4-220ENST00000513578 PSTPIP1O43586 416 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 ZNF623O75123 536 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 RPS6KA5O75582 802 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 PGK1P00558 417 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 SETSIPP0DME0 302 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 PAX3P23760 479 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 RWDD2BP57060 319 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 ZNF268Q14587 947 aaPredicted RBP8.88□□□□□ -0.99
RNF4-220ENST00000513578 KCNA10Q16322 511 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 CYP1B1Q16678 543 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 LRRC38Q5VT99 294 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 LCLAT1Q6UWP7 414 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 MMS22LQ6ZRQ5 1243 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 HDXQ7Z353 690 aa8.88□□□□□ -0.99
RNF4-220ENST00000513578 RNF180Q86T96 592 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms