RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 NPNTQ6UXI9 565 aa6.71□□□□□ -1.34
CHD1-209ENST00000512844 CCDC149Q6ZUS6 474 aa6.71□□□□□ -1.34
CHD1-209ENST00000512844 TMEM60Q9H2L4 133 aa6.71□□□□□ -1.34
CHD1-209ENST00000512844 UNKLQ9H9P5 680 aaKnown RBP6.71□□□□□ -1.34
CHD1-209ENST00000512844 CHPF2Q9P2E5 772 aa6.71□□□□□ -1.34
CHD1-209ENST00000512844 RAD54BQ9Y620 910 aa6.71□□□□□ -1.34
CHD1-209ENST00000512844 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.71□□□□□ -1.34
CHD1-209ENST00000512844 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 CCDC78A2IDD5 438 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 CFAP69A5D8W1 941 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 E9PLN8 166 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 F5H697 171 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 TRIAP1O43715 76 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 AKAP8O43823 692 aaKnown RBP6.7□□□□□ -1.34
CHD1-209ENST00000512844 DYRK1AQ13627 763 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 HLXQ14774 488 aaPredicted RBP6.7□□□□□ -1.34
CHD1-209ENST00000512844 CD300EQ496F6 205 aaPredicted RBP6.7□□□□□ -1.34
CHD1-209ENST00000512844 SLC44A4Q53GD3 710 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 ZNF783Q6ZMS7 281 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 MICALCLQ6ZW33 695 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 OVCH2Q7RTZ1 564 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 SRGAP1Q7Z6B7 1085 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 C14orf80Q86SX3 495 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 VRK3Q8IV63 474 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 PSD4Q8NDX1 1056 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 FAM46DQ8NEK8 389 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 PLBD2Q8NHP8 589 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 TTC8Q8TAM2 541 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 ASB10Q8WXI3 467 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 VKORC1Q9BQB6 163 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 PCED1AQ9H1Q7 454 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 PLEKHM1Q9Y4G2 1056 aa6.7□□□□□ -1.34
CHD1-209ENST00000512844 FRMPD2Q68DX3 1309 aaPredicted RBP6.7□□□□□ -1.34
CHD1-209ENST00000512844 WDR33Q9C0J8 1336 aaKnown RBP6.7□□□□□ -1.34
CHD1-209ENST00000512844 ORC4O43929 436 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 MGEA5O60502 916 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 UNC5CO95185 931 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 THP07101 528 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 GRPP07492 148 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 HDCP19113 662 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 SLC7A1P30825 629 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 NPTX2P47972 431 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 AGFG1P52594 562 aaKnown RBP6.69□□□□□ -1.34
CHD1-209ENST00000512844 DPTQ07507 201 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 LLGL1Q15334 1064 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 ERCC6LQ2NKX8 1250 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 HSP90AB2PQ58FF8 381 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 HECTD2Q5U5R9 776 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 DARS2Q6PI48 645 aaKnown RBP6.69□□□□□ -1.34
CHD1-209ENST00000512844 MAEAQ7L5Y9 396 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 GPR149Q86SP6 731 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 ADGRG5Q8IZF4 528 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 SLC44A3Q8N4M1 653 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 B3GALNT2Q8NCR0 500 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 OR6B3Q8NGW1 331 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 NACC2Q96BF6 587 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 Q96MF0 132 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 COQ10AQ96MF6 247 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 LRFN3Q9BTN0 628 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 PCGF6Q9BYE7 350 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 CTTNBP2NLQ9P2B4 639 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 LRIT1Q9P2V4 623 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 DKK2Q9UBU2 259 aa6.69□□□□□ -1.34
CHD1-209ENST00000512844 ING1Q9UK53 422 aaPredicted RBP6.69□□□□□ -1.34
CHD1-209ENST00000512844 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.69□□□□□ -1.34
CHD1-209ENST00000512844 A0A0B4J269 797 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 PEX1O43933 1283 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 SUN1O94901 812 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 PARNO95453 639 aaKnown RBP6.68□□□□□ -1.34
CHD1-209ENST00000512844 KITP10721 976 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 EGR2P11161 476 aaPredicted RBP6.68□□□□□ -1.34
CHD1-209ENST00000512844 PIM1P11309 404 aaPredicted RBP6.68□□□□□ -1.34
CHD1-209ENST00000512844 CHRM3P20309 590 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 NDUFV1P49821 464 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 HMGA2P52926 109 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 MPP3Q13368 585 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 TUBB3Q13509 450 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 LMBRD2Q68DH5 695 aaPredicted RBP6.68□□□□□ -1.34
CHD1-209ENST00000512844 Q6YL49 198 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 ZNF627Q7L945 461 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 SSH3Q8TE77 659 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 SUCLG2Q96I99 432 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 SORCS2Q96PQ0 1159 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 HEPHQ9BQS7 1158 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 AIFM2Q9BRQ8 373 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 MRIQ9BWK5 157 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 OBP2AQ9NY56 170 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 TPCN1Q9ULQ1 816 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 TMX2Q9Y320 296 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 PAXBP1Q9Y5B6 917 aa6.68□□□□□ -1.34
CHD1-209ENST00000512844 A0A087X1B8 175 aa6.67□□□□□ -1.34
CHD1-209ENST00000512844 PRSS29PA6NIE9 313 aa6.67□□□□□ -1.34
CHD1-209ENST00000512844 TBC1D4O60343 1298 aa6.67□□□□□ -1.34
CHD1-209ENST00000512844 GCP02774 474 aa6.67□□□□□ -1.34
CHD1-209ENST00000512844 XRCC6P12956 609 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHD1-209ENST00000512844 MC2RQ01718 297 aa6.67□□□□□ -1.34
CHD1-209ENST00000512844 CNN3Q15417 329 aaKnown RBP6.67□□□□□ -1.34
CHD1-209ENST00000512844 KIAA0753Q2KHM9 967 aa6.67□□□□□ -1.34
CHD1-209ENST00000512844 LONRF3Q496Y0 759 aa6.67□□□□□ -1.34
CHD1-209ENST00000512844 TAF2Q6P1X5 1199 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms