RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ZNF785A8K8V0 405 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 KRTAP29-1A8MX34 341 aaPredicted RBP3.04□□□□□ -1.92
PDGFC-208ENST00000512711 ERBB2P04626 1255 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 NHLRC4P0CG21 123 aaPredicted RBP3.04□□□□□ -1.92
PDGFC-208ENST00000512711 JUPP14923 745 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 WT1P19544 449 aaPredicted RBP3.04□□□□□ -1.92
PDGFC-208ENST00000512711 PDCP20941 246 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 PRDX5P30044 214 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 ZNF135P52742 658 aaPredicted RBP3.04□□□□□ -1.92
PDGFC-208ENST00000512711 PREPLQ4J6C6 727 aaPredicted RBP3.04□□□□□ -1.92
PDGFC-208ENST00000512711 TMEM119Q4V9L6 283 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 VPS53Q5VIR6 699 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 SLC4A10Q6U841 1118 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 TTC7BQ86TV6 843 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 PPP1R3BQ86XI6 285 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 FAM90A1Q86YD7 464 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 PDSS2Q86YH6 399 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 PRR18Q8N4B5 295 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.04□□□□□ -1.92
PDGFC-208ENST00000512711 PSD4Q8NDX1 1056 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 SCAMP4Q969E2 229 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 SARAFQ96BY9 339 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 ZNF778Q96MU6 729 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 HAPLN3Q96S86 360 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 HEPHQ9BQS7 1158 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 TPSD1Q9BZJ3 242 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 GPR35Q9HC97 309 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 SERHLQ9NQF3 203 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 RNF7Q9UBF6 113 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 NEU2Q9Y3R4 380 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 NR2E3Q9Y5X4 410 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 MRFAP1Q9Y605 127 aa3.04□□□□□ -1.92
PDGFC-208ENST00000512711 SPATA31A3Q5VYP0 1347 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 A0A0B4J269 797 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 CCDC151A5D8V7 595 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 E7ENX8 843 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 PPM1DO15297 605 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 AHSGP02765 367 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 CELA2AP08217 269 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 GPD1P21695 349 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 SMARCA1P28370 1054 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 CYP2C19P33261 490 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 ADKP55263 362 aaKnown RBP3.03□□□□□ -1.92
PDGFC-208ENST00000512711 KRT85P78386 507 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 TAP2Q03519 686 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 PIGFQ07326 219 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 TUBB3Q13509 450 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 NBPF8Q3BBV2 869 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 RBM20Q5T481 1227 aaKnown RBP3.03□□□□□ -1.92
PDGFC-208ENST00000512711 PPP4R3AQ6IN85 833 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 ZNF782Q6ZMW2 699 aaPredicted RBP3.03□□□□□ -1.92
PDGFC-208ENST00000512711 BHLHA9Q7RTU4 235 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 GRASPQ7Z6J2 395 aaPredicted RBP3.03□□□□□ -1.92
PDGFC-208ENST00000512711 USP37Q86T82 979 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 CAMKK1Q8N5S9 505 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 B3GALNT2Q8NCR0 500 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 C3orf20Q8ND61 904 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 TNPO1Q92973 898 aaKnown RBP3.03□□□□□ -1.92
PDGFC-208ENST00000512711 SMOQ99835 787 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 ACTRT3Q9BYD9 372 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 SLC29A3Q9BZD2 475 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 ASPSCR1Q9BZE9 553 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 MRPL46Q9H2W6 279 aaKnown RBP3.03□□□□□ -1.92
PDGFC-208ENST00000512711 SIDT1Q9NXL6 827 aaKnown RBP3.03□□□□□ -1.92
PDGFC-208ENST00000512711 ABCF2Q9UG63 623 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 PCDHA1Q9Y5I3 950 aa3.03□□□□□ -1.92
PDGFC-208ENST00000512711 CFAP20Q9Y6A4 193 aaKnown RBP3.03□□□□□ -1.92
PDGFC-208ENST00000512711 ANXA1P04083 346 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 CDK4P11802 303 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 HDCP19113 662 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 CCND1P24385 295 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 PCSK6P29122 969 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 NDUFV1P49821 464 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 ZNF134P52741 427 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 HK3P52790 923 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 NXPH1P58417 271 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 ITIH3Q06033 890 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 KIF22Q14807 665 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 TBCCQ15814 346 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 FCRLBQ6BAA4 426 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 HEATR3Q7Z4Q2 680 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 CATIPQ7Z7H3 387 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 CELF5Q8N6W0 485 aaKnown RBP3.02□□□□□ -1.93
PDGFC-208ENST00000512711 SMAD5Q99717 465 aaKnown RBP3.02□□□□□ -1.93
PDGFC-208ENST00000512711 SLC13A1Q9BZW2 595 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 SERTAD4Q9NUC0 356 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 SERGEFQ9UGK8 458 aa3.02□□□□□ -1.93
PDGFC-208ENST00000512711 DCLK1O15075 740 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 TRIAP1O43715 76 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 HNRNPCP07910 306 aaKnown RBP eCLIP3.01□□□□□ -1.93
PDGFC-208ENST00000512711 POU2F2P09086 479 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 RARBP10826 455 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 ZFXP17010 805 aaPredicted RBP3.01□□□□□ -1.93
PDGFC-208ENST00000512711 PIK3CGP48736 1102 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 CCT8P50990 548 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 MAP2K6P52564 334 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 TCF15Q12870 199 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 EIF2B5Q13144 721 aaKnown RBP3.01□□□□□ -1.93
PDGFC-208ENST00000512711 NOGQ13253 232 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 RNF187Q5TA31 235 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms