RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 HPS3Q969F9 1004 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 JSRP1Q96MG2 331 aaPredicted RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 FAM96AQ9H5X1 160 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 LGR6Q9HBX8 967 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 ADARB2Q9NS39 739 aaKnown RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.32□□□□□ -0.92
VCAN-208ENST00000512590 COPG2Q9UBF2 871 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 AK5Q9Y6K8 562 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 TMEM94Q12767 1356 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 TRIM64BA6NI03 449 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 HNRNPRO43390 633 aaKnown RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 SLC25A12O75746 678 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 RHOBTB1O94844 696 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 GSTM1P09488 218 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 SLC2A3P11169 496 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 GRK4P32298 578 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 NOS2P35228 1153 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 HSD17B3P37058 310 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 CBX5P45973 191 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 CDK8P49336 464 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 ATP12AP54707 1039 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 PADI6Q6TGC4 694 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 PPP4R3CPQ6ZMV5 832 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 RBM23Q86U06 439 aaKnown RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 MRPL50Q8N5N7 158 aaKnown RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 MED23Q9ULK4 1368 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 PFASO15067 1338 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 EHBP1L1Q8N3D4 1523 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 EVPLLA8MZ36 301 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 MLYCDO95822 493 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 BCAR1P56945 870 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 RHOAP61586 193 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 PLGLB1Q02325 96 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 STX4Q12846 297 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 ZNHIT3Q15649 155 aaPredicted RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 DCAF6Q58WW2 860 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 HSDL2Q6YN16 418 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 NEK10Q6ZWH5 1172 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 RNF44Q7L0R7 432 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 FAM124AQ86V42 546 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 C2orf81A6NN90 581 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 NPTXRO95502 500 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 CMA1P23946 247 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 RAD23AP54725 363 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 MAPRE2Q15555 327 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 TRADDQ15628 312 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 GPR135Q8IZ08 494 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 SCFD2Q8WU76 684 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 PRMT1Q99873 361 aaKnown RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 FBXO2Q9UK22 296 aaPredicted RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 SOX13Q9UN79 622 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 MAGI1Q96QZ7 1491 aaPredicted RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 PIK3CDO00329 1044 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 SLC9A3R1O14745 358 aaPredicted RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 ATP5BP06576 529 aaKnown RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 GCLCP48506 637 aaPredicted RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 ALDH9A1P49189 494 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 STXBP1P61764 594 aaKnown RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 CREMQ03060 361 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 PRAMEF18Q5VWM3 479 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 FBXO22Q8NEZ5 403 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 DYNLL2Q96FJ2 89 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 RPRD1AQ96P16 312 aaPredicted RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 MRPL9Q9BYD2 267 aaKnown RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 JPH1Q9HDC5 661 aaPredicted RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 DIABLOQ9NR28 239 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 MRPS23Q9Y3D9 190 aaKnown RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 APOA1P02647 267 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 PHKG2P15735 406 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 RRM2P31350 389 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 NUP107P57740 925 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 SP3Q02447 781 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 RUNX1T1Q06455 604 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 PNOCQ13519 176 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 DUOXA2Q1HG44 320 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 SLC9A4Q6AI14 798 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 NLRP14Q86W24 1093 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 GATAD2AQ86YP4 633 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 MPP5Q8N3R9 675 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 HIPK4Q8NE63 616 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 ATXN7L3BQ96GX2 97 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 CNOT6LQ96LI5 555 aaKnown RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 TLR8Q9NR97 1041 aaKnown RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 ERAP1Q9NZ08 941 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 HCN3Q9P1Z3 774 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 MAP3K19Q56UN5 1328 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 CCDC195A0A1B0GUA6 201 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 PFKFB2O60825 505 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 RHOCP08134 193 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 GRAMD1BQ3KR37 738 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 RPTNQ6XPR3 784 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 GALNT7Q86SF2 657 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 PIGOQ8TEQ8 1089 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 UXTQ9UBK9 157 aaPredicted RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 SAR1BQ9Y6B6 198 aa9.31□□□□□ -0.92
VCAN-208ENST00000512590 URB2Q14146 1524 aaKnown RBP9.31□□□□□ -0.92
VCAN-208ENST00000512590 USP27XA6NNY8 438 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 E7EWF7 191 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 MAGEC1O60732 1142 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms