RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 TM6SF1Q9BZW5 370 aa13.68□□□□□ -0.22
DDX41-215ENST00000512431 CRISPLD1Q9H336 500 aa13.68□□□□□ -0.22
DDX41-215ENST00000512431 EBF3Q9H4W6 596 aa13.68□□□□□ -0.22
DDX41-215ENST00000512431 KMT5AQ9NQR1 393 aa13.68□□□□□ -0.22
DDX41-215ENST00000512431 HSFX1Q9UBD0 423 aa13.68□□□□□ -0.22
DDX41-215ENST00000512431 EBF1Q9UH73 591 aa13.68□□□□□ -0.22
DDX41-215ENST00000512431 RBM19Q9Y4C8 960 aaKnown RBP13.68□□□□□ -0.22
DDX41-215ENST00000512431 NEUROG3Q9Y4Z2 214 aa13.68□□□□□ -0.22
DDX41-215ENST00000512431 MTMR11A4FU01 709 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 BTBD18B2RXH4 712 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 DCLK1O15075 740 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 VNN2O95498 520 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 MCM7P33993 719 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 NPTX2P47972 431 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 GALK1P51570 392 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 CYP4F8P98187 520 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 BFSP1Q12934 665 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 STRN3Q13033 797 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 DMP1Q13316 513 aaPredicted RBP13.67□□□□□ -0.22
DDX41-215ENST00000512431 DMC1Q14565 340 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 OVOS1Q6IE37 1185 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 CYP2U1Q7Z449 544 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 SKAP1Q86WV1 359 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 RPLP0P6Q8NHW5 317 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 CCDC26Q8TAB7 109 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 P2RY13Q9BPV8 354 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 FAM83CQ9BQN1 747 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 TMEM60Q9H2L4 133 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 BHMT2Q9H2M3 363 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 TUBGCP4Q9UGJ1 667 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 ZZEF1O43149 2961 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 LAMA1P25391 3075 aa13.67□□□□□ -0.22
DDX41-215ENST00000512431 EPB41L2O43491 1005 aaKnown RBP13.66□□□□□ -0.22
DDX41-215ENST00000512431 XPOTO43592 962 aaKnown RBP13.66□□□□□ -0.22
DDX41-215ENST00000512431 PFKFB2O60825 505 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 SOAT2O75908 522 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 MATR3P43243 847 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDX41-215ENST00000512431 LMAN2Q12907 356 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 PSMD2Q13200 908 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 SLC10A6Q3KNW5 377 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 MGAT5BQ3V5L5 792 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 KIAA1211LQ6NV74 962 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 DIS3L2Q8IYB7 885 aaKnown RBP13.66□□□□□ -0.22
DDX41-215ENST00000512431 CMTM8Q8IZV2 173 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 DEFB124Q8NES8 71 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 SEPT5Q99719 369 aaPredicted RBP13.66□□□□□ -0.22
DDX41-215ENST00000512431 SLC46A2Q9BY10 475 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 SMG9Q9H0W8 520 aaKnown RBP13.66□□□□□ -0.22
DDX41-215ENST00000512431 PLEKHA5Q9HAU0 1116 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 HPS4Q9NQG7 708 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 POLR3BQ9NW08 1133 aaPredicted RBP13.66□□□□□ -0.22
DDX41-215ENST00000512431 MSRB2Q9Y3D2 182 aa13.66□□□□□ -0.22
DDX41-215ENST00000512431 WNT7AO00755 349 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 CDX4O14627 284 aaPredicted RBP13.65□□□□□ -0.22
DDX41-215ENST00000512431 HYAL3O43820 417 aaPredicted RBP13.65□□□□□ -0.22
DDX41-215ENST00000512431 DTNBO60941 627 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 TOM1L1O75674 476 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 TYMPP19971 482 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 PROZP22891 400 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 LRPAP1P30533 357 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 CCT6AP40227 531 aaKnown RBP13.65□□□□□ -0.22
DDX41-215ENST00000512431 NOLC1Q14978 699 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDX41-215ENST00000512431 PDGFRLQ15198 375 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 SEZ6Q53EL9 994 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 PMS2CLQ68D20 193 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 TRIM68Q6AZZ1 485 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.22
DDX41-215ENST00000512431 TSTD1Q8NFU3 115 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 LPIN3Q9BQK8 851 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 KIF9Q9HAQ2 790 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 TDP1Q9NUW8 608 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 ANKFY1Q9P2R3 1169 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 KCNG1Q9UIX4 513 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 UBQLN1Q9UMX0 589 aaKnown RBP13.65□□□□□ -0.22
DDX41-215ENST00000512431 INVSQ9Y283 1065 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 TRIP11Q15643 1979 aa13.65□□□□□ -0.22
DDX41-215ENST00000512431 CLDN3O15551 220 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 LARGE1O95461 756 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 OR52Z1P0C646 297 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 ODC1P11926 461 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 CYP3A5P20815 502 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 DDX6P26196 483 aaKnown RBP eCLIP13.64□□□□□ -0.23
DDX41-215ENST00000512431 DHPSP49366 369 aaPredicted RBP13.64□□□□□ -0.23
DDX41-215ENST00000512431 IRX4P78413 519 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 CPA6Q8N4T0 437 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 TTC9BQ8N6N2 239 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 PIGKQ92643 395 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 CHFRQ96EP1 664 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 ZBTB45Q96K62 511 aaPredicted RBP13.64□□□□□ -0.23
DDX41-215ENST00000512431 NUSAP1Q9BXS6 441 aaKnown RBP13.64□□□□□ -0.23
DDX41-215ENST00000512431 C17orf75Q9HAS0 396 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 FBRSL1Q9HCM7 1045 aaKnown RBP13.64□□□□□ -0.23
DDX41-215ENST00000512431 ARHGAP28Q9P2N2 729 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 KIAA1024Q9UPX6 916 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 CEP295Q9C0D2 2601 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 SPAG17Q6Q759 2223 aa13.64□□□□□ -0.23
DDX41-215ENST00000512431 SDK1Q7Z5N4 2213 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms