RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 L1RE1Q9UN81 338 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 IGLV3-22A0A075B6J6 115 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 PBX1P40424 430 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 EPHB1P54762 984 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 TPI1P60174 286 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 CENPCQ03188 943 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 UGCGQ16739 394 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 CLEC16AQ2KHT3 1053 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 TREML2Q5T2D2 321 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 SH2D3CQ8N5H7 860 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 ASAP3Q8TDY4 903 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 KAT5Q92993 513 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 NUDCD1Q96RS6 583 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 MLXIPLQ9NP71 852 aa13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.77□□□□□ -0.2
PCDHA4-202ENST00000512229 GPR182O15218 404 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 LSM8O95777 96 aaKnown RBP13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 FAM200BP0CF97 657 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 IRX4P78413 519 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 DEUP1Q05D60 604 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 TINF2Q9BSI4 451 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 FSD1LQ9BXM9 530 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 FOXP3Q9BZS1 431 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 RRP15Q9Y3B9 282 aaKnown RBP13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 NEU2Q9Y3R4 380 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 CFAP69A5D8W1 941 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 GMNCA6NCL1 334 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 SPDYE5A6NIY4 337 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 F5H423 210 aaPredicted RBP13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 MAPK13O15264 365 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 CDH16O75309 829 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 GPC4O75487 556 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 PROSCO94903 275 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 HNRNPH3P31942 346 aaKnown RBP13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 ITPRIPL1Q6GPH6 555 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 TTC17Q96AE7 1141 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 ARHGEF26Q96DR7 871 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 TMEM176AQ96HP8 235 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 VPS39Q96JC1 886 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 SYT17Q9BSW7 474 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
PCDHA4-202ENST00000512229 GOLGA8CPA6NN73 597 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 PSTPIP1O43586 416 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 CCNE2O96020 404 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 DNAJB3Q8WWF6 145 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 FUT8Q9BYC5 575 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 FGFBP2Q9BYJ0 223 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 TPX2Q9ULW0 747 aaKnown RBP13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 TRPM3Q9HCF6 1732 aaPredicted RBP13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 M0R2N6 131 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 KPNA6O60684 536 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 USP2O75604 605 aaPredicted RBP13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 HNRNPH2P55795 449 aaKnown RBP13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 RTP1P59025 263 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 KYNUQ16719 465 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 PHLDB3Q6NSJ2 640 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 TLK2Q86UE8 772 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 MCOLN2Q8IZK6 566 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 ZIM3Q96PE6 472 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 RAB3IPQ96QF0 476 aaPredicted RBP13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 GANQ9H2C0 597 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 COL20A1Q9P218 1284 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 KPNA2P52292 529 aaKnown RBP13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 ASPHQ12797 758 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 CCDC38Q502W7 563 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 KLHL29Q96CT2 875 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 GCNAQ96QF7 691 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 PLEKHA5Q9HAU0 1116 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 MID2Q9UJV3 735 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 CASZ1Q86V15 1759 aa13.76□□□□□ -0.21
PCDHA4-202ENST00000512229 RNF225M0QZC1 329 aaPredicted RBP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 MAFO75444 373 aaPredicted RBP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 MX2P20592 715 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 EP400NLQ6ZTU2 488 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 FAM47EQ6ZV65 393 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 NOP9Q86U38 636 aaKnown RBP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 OR2W6PQ8NHA6 318 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 ACSF2Q96CM8 615 aaPredicted RBP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 SNTG2Q9NY99 539 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 ARHGAP42A6NI28 874 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 ADRB2P07550 413 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 XPAP23025 273 aaPredicted RBP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 PMLP29590 882 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 OR1G1P47890 313 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 MARSP56192 900 aaKnown RBP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 C11orf63Q6NUN7 778 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 TAF2Q6P1X5 1199 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 LRIG3Q6UXM1 1119 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 ANKMY2Q8IV38 441 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 PCSK9Q8NBP7 692 aaKnown RBP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 MCUQ8NE86 351 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 CLEC4DQ8WXI8 215 aa13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 PRG3Q9Y2Y8 225 aaPredicted RBP13.75□□□□□ -0.21
PCDHA4-202ENST00000512229 SNED1Q8TER0 1413 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms