RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, human

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP2-215	ENST00000512098	RBM28	Q9NW13	759 aa	Known RBP	13.95	□□□□□ -0.18
SSBP2-215	ENST00000512098	ZMYM5	Q9UJ78	669 aa		13.95	□□□□□ -0.18
SSBP2-215	ENST00000512098	MMP17	Q9ULZ9	603 aa		13.95	□□□□□ -0.18
SSBP2-215	ENST00000512098	AP5Z1	O43299	807 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	HLA-E	P13747	358 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	CYP4A11	Q02928	519 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	PSMD2	Q13200	908 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	CAPS	Q13938	189 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	SMAD1	Q15797	465 aa	Known RBP	13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	CTXN3	Q4LDR2	81 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	TAF1B	Q53T94	588 aa	Predicted RBP	13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	ZNF280D	Q6N043	979 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	PPP4R3CP	Q6ZMV5	832 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	RNF19B	Q6ZMZ0	732 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	MARCH9	Q86YJ5	346 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	RAB11FIP4	Q86YS3	637 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	FRMD1	Q8N878	549 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	PSMG2	Q969U7	264 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	OSBPL3	Q9H4L5	887 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	XPNPEP1	Q9NQW7	623 aa		13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098	DAXX	Q9UER7	740 aa	Predicted RBP	13.94	□□□□□ -0.18
SSBP2-215	ENST00000512098		A0A1W2PQD8	194 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	TLX3	O43711	291 aa	Predicted RBP	13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	C6	P13671	934 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	U2AF2	P26368	475 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	GABRR2	P28476	465 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	MCM5	P33992	734 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098		Q4G0T1	1027 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	SGMS1	Q86VZ5	419 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	MICU3	Q86XE3	530 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	C6orf50	Q9HD87	102 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	BSN	Q9UPA5	3926 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	BOD1L1	Q8NFC6	3051 aa		13.93	□□□□□ -0.18
SSBP2-215	ENST00000512098	VNN2	O95498	520 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	ARSA	P15289	507 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	IL12RB1	P42701	662 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	RHD	Q02161	417 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	PDGFRL	Q15198	375 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	TMEM92	Q6UXU6	159 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	C4orf19	Q8IY42	314 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	ASAP3	Q8TDY4	903 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	NXPE2	Q96DL1	559 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	ZDHHC5	Q9C0B5	715 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	SEMA4C	Q9C0C4	833 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	ECT2	Q9H8V3	914 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	GOLGA2P5	Q9HBQ8	144 aa		13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.92	□□□□□ -0.18
SSBP2-215	ENST00000512098	USP9Y	O00507	2555 aa	Predicted RBP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	N4BP3	O15049	544 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	SLC28A2	O43868	658 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	MARCH6	O60337	910 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	P4HB	P07237	508 aa	Known RBP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	ATXN1L	P0C7T5	689 aa	Known RBP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	ZNF883	P0CG24	379 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	CPB1	P15086	417 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	GNA11	P29992	359 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	YWHAB	P31946	246 aa	Known RBP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	ARL2	P36404	184 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	ALDH1A3	P47895	512 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	PTH1R	Q03431	593 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	ZNF33A	Q06730	810 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	PFKFB3	Q16875	520 aa	Predicted RBP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	FAM187B	Q17R55	369 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	GLRA4	Q5JXX5	417 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	SLC36A4	Q6YBV0	504 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	OTUD6A	Q7L8S5	288 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	FMNL3	Q8IVF7	1028 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	CMTM8	Q8IZV2	173 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	CPA6	Q8N4T0	437 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	SNIP1	Q8TAD8	396 aa	Known RBP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	BAP1	Q92560	729 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	CDC6	Q99741	560 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	SLC46A2	Q9BY10	475 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	SMG9	Q9H0W8	520 aa	Known RBP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	CRISPLD1	Q9H336	500 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	PDZD7	Q9H5P4	517 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	KIF9	Q9HAQ2	790 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	IL17B	Q9UHF5	180 aa		13.91	□□□□□ -0.18
SSBP2-215	ENST00000512098	C2CD3	Q4AC94	2353 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	FAM149A	A5PLN7	773 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098		K7EQS6	105 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	EML1	O00423	815 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	CDC25C	P30307	473 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	MRPS21	P82921	87 aa	Known RBP	13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	CYP4F8	P98187	520 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	DUSP4	Q13115	394 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	PKDCC	Q504Y2	493 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	C2orf27A	Q580R0	203 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	DBX2	Q6ZNG2	339 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	ITIH5	Q86UX2	942 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	APPL2	Q8NEU8	664 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	ETNPPL	Q8TBG4	499 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	SUSD3	Q96L08	255 aa		13.9	□□□□□ -0.18
SSBP2-215	ENST00000512098	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms