RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 BMP2KQ9NSY1 1161 aaPredicted RBP8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 MMP17Q9ULZ9 603 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 ADAMTS3O15072 1205 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 AP5Z1O43299 807 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 EDIL3O43854 480 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 KRT38O76015 456 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 C6P13671 934 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 HLA-EP13747 358 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 ARSAP15289 507 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 GABRR2P28476 465 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 IL12RB1P42701 662 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 LIFRP42702 1097 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 FUT2Q10981 343 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 BYSLQ13895 437 aaKnown RBP8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 CAPSQ13938 189 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 SMAD1Q15797 465 aaKnown RBP8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 CTXN3Q4LDR2 81 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 ZNF280DQ6N043 979 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 FMNL3Q8IVF7 1028 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 REXO1Q8N1G1 1221 aaKnown RBP8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 NXPE2Q96DL1 559 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 TMEM87BQ96K49 555 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 PPP1R10Q96QC0 940 aaKnown RBP8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 MTRQ99707 1265 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 SEMA4CQ9C0C4 833 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 SLC12A7Q9Y666 1083 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 KNL1Q8NG31 2342 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 ABCA12Q86UK0 2595 aa8.49□□□□□ -1.05
DEPDC1B-205ENST00000512078 A0A1W2PQD8 194 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 FAM149AA5PLN7 773 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 PRC1O43663 620 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 DKC1O60832 514 aaKnown RBP eCLIP8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 VNN2O95498 520 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 ATXN1LP0C7T5 689 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 HNRNPLP14866 589 aaKnown RBP eCLIP8.48□□□□□ -1.053e-8■■■□□ 15.1
DEPDC1B-205ENST00000512078 CPB1P15086 417 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 QARSP47897 775 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 EPHB3P54753 998 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 RHDQ02161 417 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 TMEM92Q6UXU6 159 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 RNF19BQ6ZMZ0 732 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 MICU3Q86XE3 530 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 SNIP1Q8TAD8 396 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 BAP1Q92560 729 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 PSMG2Q969U7 264 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 CCDC136Q96JN2 1154 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 PRIMPOLQ96LW4 560 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 ZMYND12Q9H0C1 365 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 SMG9Q9H0W8 520 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 XPNPEP1Q9NQW7 623 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 RBM28Q9NW13 759 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 ZMYM5Q9UJ78 669 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 CIZ1Q9ULV3 898 aaPredicted RBP8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 ASB3Q9Y575 518 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 TMEM131Q92545 1883 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 CCER2I3L3R5 266 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 CYP4F8P98187 520 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 CYP4A11Q02928 519 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 ZNF33AQ06730 810 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 PDGFRLQ15198 375 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 GLRA4Q5JXX5 417 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 TTC30AQ86WT1 665 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 CPA6Q8N4T0 437 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 ASAP3Q8TDY4 903 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 CDC6Q99741 560 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 CRISPLD1Q9H336 500 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 KIF9Q9HAQ2 790 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 GOLGA2P5Q9HBQ8 144 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 IL17BQ9UHF5 180 aa8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 V9GY48 417 aaPredicted RBP8.48□□□□□ -1.05
DEPDC1B-205ENST00000512078 C2CD3Q4AC94 2353 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 LRRK2Q5S007 2527 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 ANAPC1Q9H1A4 1944 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 PLK4O00444 970 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 N4BP3O15049 544 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 MARCH6O60337 910 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 ZNF883P0CG24 379 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 USP11P51784 963 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 CXADRP78310 365 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 RPL6Q02878 288 aaKnown RBP8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 TLE3Q04726 772 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 Q4G0T1 1027 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 PKDCCQ504Y2 493 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 C2orf27AQ580R0 203 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 SLC36A4Q6YBV0 504 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 DNAJB7Q7Z6W7 309 aaPredicted RBP8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 CMTM8Q8IZV2 173 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 SETD7Q8WTS6 366 aaKnown RBP8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 SLC46A2Q9BY10 475 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 ZDHHC5Q9C0B5 715 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 PDZD7Q9H5P4 517 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 ECT2Q9H8V3 914 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 C6orf50Q9HD87 102 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 PRMT7Q9NVM4 692 aaPredicted RBP8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 WRAP73Q9P2S5 460 aaPredicted RBP8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 ANKMY1Q9P2S6 941 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 CCL26Q9Y258 94 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 MYOFQ9NZM1 2061 aa8.47□□□□□ -1.05
DEPDC1B-205ENST00000512078 NID2Q14112 1375 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms