RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 CCSAPQ6IQ19 270 aaPredicted RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 TMEM270Q6UE05 265 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 SCARA5Q6ZMJ2 495 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 Q6ZVU0 165 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 RPAINQ86UA6 219 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 FAM228AQ86W67 206 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 GLYCTKQ8IVS8 523 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 EFCAB13Q8IY85 973 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 TMEM192Q8IY95 271 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 FAM71AQ8IYT1 594 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 SLC35F6Q8N357 371 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 TTC39CQ8N584 583 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 RNF10Q8N5U6 811 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 USP38Q8NB14 1042 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 MNS1Q8NEH6 495 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 SH3TC2Q8TF17 1288 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 KAT5Q92993 513 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 FAXDC2Q96IV6 333 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 SNX27Q96L92 541 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 ZNF560Q96MR9 790 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 KREMEN1Q96MU8 473 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 TUBB2BQ9BVA1 445 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 EIF2AQ9BY44 585 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 GPR88Q9GZN0 384 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 SENP6Q9GZR1 1112 aaPredicted RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 DPP3Q9NY33 737 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 NXF1Q9UBU9 619 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 NAGPAQ9UK23 515 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 INTUQ9ULD6 942 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 UBQLN1Q9UMX0 589 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 PTPN22Q9Y2R2 807 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 REXO2Q9Y3B8 237 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 NOC2LQ9Y3T9 749 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 CEP83Q9Y592 693 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 PCDHB2Q9Y5E7 798 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 PDCD11Q14690 1871 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 MYH10P35580 1976 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 DNM1LO00429 736 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 NRG2O14511 850 aaPredicted RBP8.63□□□□□ -1.03
HTT-209ENST00000512068 PJA2O43164 708 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 THAP12O43422 761 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 MED7O43513 233 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 GFRA3O60609 400 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 SGPL1O95470 568 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 AVPP01185 164 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 GHRP10912 638 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 CYP11B1P15538 503 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 CD58P19256 250 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 IBSPP21815 317 aaPredicted RBP8.63□□□□□ -1.03
HTT-209ENST00000512068 GNA15P30679 374 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 HOXA11P31270 313 aaPredicted RBP8.63□□□□□ -1.03
HTT-209ENST00000512068 ARHGAP25P42331 645 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 CDR2Q01850 454 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 BFSP2Q13515 415 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 ELOAQ14241 798 aaKnown RBP8.63□□□□□ -1.03
HTT-209ENST00000512068 SLC10A6Q3KNW5 377 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 CRTC2Q53ET0 693 aaPredicted RBP8.63□□□□□ -1.03
HTT-209ENST00000512068 TRIM72Q6ZMU5 477 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 RBBP8NLQ8NC74 664 aaPredicted RBP8.63□□□□□ -1.03
HTT-209ENST00000512068 TMEM40Q8WWA1 233 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 PGBD4Q96DM1 585 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 TRIM11Q96F44 468 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 HPDLQ96IR7 371 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 FAM84AQ96KN4 292 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 MMS19Q96T76 1030 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 NXF3Q9H4D5 531 aaKnown RBP8.63□□□□□ -1.03
HTT-209ENST00000512068 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 TRMT13Q9NUP7 481 aaKnown RBP8.63□□□□□ -1.03
HTT-209ENST00000512068 SLC38A7Q9NVC3 462 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 DNAAF2Q9NVR5 837 aaKnown RBP8.63□□□□□ -1.03
HTT-209ENST00000512068 ST3GAL5Q9UNP4 418 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 AGAP1Q9UPQ3 857 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 PHF24Q9UPV7 400 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 IPPQ9Y573 584 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 NUB1Q9Y5A7 615 aa8.63□□□□□ -1.03
HTT-209ENST00000512068 BTNL10A8MVZ5 291 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 ARVCFO00192 962 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 DDX3XO00571 662 aaKnown RBP eCLIP8.62□□□□□ -1.03
HTT-209ENST00000512068 ZNF263O14978 683 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 BUB1O43683 1085 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 RTN2O75298 545 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 MOCS3O95396 460 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 CST3P01034 146 aaPredicted RBP8.62□□□□□ -1.03
HTT-209ENST00000512068 TMEM253P0C7T8 217 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 CD19P15391 556 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 ABCB4P21439 1286 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 AKAP5P24588 427 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 PNPLA4P41247 253 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 NSFP46459 744 aaKnown RBP8.62□□□□□ -1.03
HTT-209ENST00000512068 TERF1P54274 439 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 MGAT3Q09327 533 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 LAPTM4AQ15012 233 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 WDR72Q3MJ13 1102 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 LIN9Q5TKA1 542 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 NOP9Q86U38 636 aaKnown RBP8.62□□□□□ -1.03
HTT-209ENST00000512068 SLC47A2Q86VL8 602 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 SYCE1Q8N0S2 351 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 C1orf127Q8N9H9 656 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms