RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 PMS2CLQ68D20 193 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 CENPPQ6IPU0 288 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 PROSER1Q86XN7 944 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 CATSPER3Q86XQ3 398 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 CCDC26Q8TAB7 109 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 OXER1Q8TDS5 423 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 ANKFY1Q9P2R3 1169 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 EVLQ9UI08 416 aaPredicted RBP12.63□□□□□ -0.39
RNF4-216ENST00000511859 DENND4CQ5VZ89 1909 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 URB1O60287 2271 aaKnown RBP12.62□□□□□ -0.39
RNF4-216ENST00000511859 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
RNF4-216ENST00000511859 PRAMEF12O95522 483 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 CDC25CP30307 473 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 DGKEP52429 567 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 OSTNP61366 133 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 TOB2Q14106 344 aaPredicted RBP12.62□□□□□ -0.39
RNF4-216ENST00000511859 DMC1Q14565 340 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 KIAA1211LQ6NV74 962 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 CYP2U1Q7Z449 544 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 USP37Q86T82 979 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 CEP120Q8N960 986 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 RPLP0P6Q8NHW5 317 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 ACDQ96AP0 544 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 PGLYRP2Q96PD5 576 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 ACO2Q99798 780 aaKnown RBP12.62□□□□□ -0.39
RNF4-216ENST00000511859 P2RY13Q9BPV8 354 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 CRISPLD1Q9H336 500 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 FBRSL1Q9HCM7 1045 aaKnown RBP12.62□□□□□ -0.39
RNF4-216ENST00000511859 PTPRHQ9HD43 1115 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 HPS4Q9NQG7 708 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 KLK13Q9UKR3 277 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 SLC27A5Q9Y2P5 690 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 GPSM3Q9Y4H4 160 aa12.62□□□□□ -0.39
RNF4-216ENST00000511859 BPTFQ12830 3046 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 OTOL1A6NHN0 477 aaPredicted RBP12.61□□□□□ -0.39
RNF4-216ENST00000511859 UPK3BL1B0FP48 263 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 UPK3BL2E5RIL1 263 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 CDKL5O76039 1030 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 CAPNS1P04632 268 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 MYBPC2Q14324 1141 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 ZNF568Q3ZCX4 644 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
RNF4-216ENST00000511859 RUFY3Q7L099 469 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 PDZD3Q86UT5 571 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 CMTM8Q8IZV2 173 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 KIFAP3Q92845 792 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 C18orf25Q96B23 403 aaPredicted RBP12.61□□□□□ -0.39
RNF4-216ENST00000511859 CHFRQ96EP1 664 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 GCNAQ96QF7 691 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 MTMR9Q96QG7 549 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 TCHPQ9BT92 498 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 POLR3CQ9BUI4 534 aaPredicted RBP12.61□□□□□ -0.39
RNF4-216ENST00000511859 KIFC3Q9BVG8 833 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 SLC46A2Q9BY10 475 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 CDT1Q9H211 546 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 EBF3Q9H4W6 596 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 POLR3BQ9NW08 1133 aaPredicted RBP12.61□□□□□ -0.39
RNF4-216ENST00000511859 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.61□□□□□ -0.39
RNF4-216ENST00000511859 PHLPP2Q6ZVD8 1323 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 APC2O95996 2303 aa12.61□□□□□ -0.39
RNF4-216ENST00000511859 ARHGEF35A5YM69 484 aa12.6□□□□□ -0.39
RNF4-216ENST00000511859 PATE3B3GLJ2 98 aa12.6□□□□□ -0.39
RNF4-216ENST00000511859 NEMFO60524 1076 aa12.6□□□□□ -0.39
RNF4-216ENST00000511859 OR4Q2P0C623 313 aa12.6□□□□□ -0.39
RNF4-216ENST00000511859 MCF2P10911 925 aa12.6□□□□□ -0.39
RNF4-216ENST00000511859 TUFMP49411 452 aaKnown RBP12.6□□□□□ -0.39
RNF4-216ENST00000511859 SIM1P81133 766 aaPredicted RBP12.6□□□□□ -0.39
RNF4-216ENST00000511859 ATAD1Q8NBU5 361 aa12.6□□□□□ -0.39
RNF4-216ENST00000511859 TSTD1Q8NFU3 115 aa12.6□□□□□ -0.39
RNF4-216ENST00000511859 NUSAP1Q9BXS6 441 aaKnown RBP12.6□□□□□ -0.39
RNF4-216ENST00000511859 MRPL4Q9BYD3 311 aaKnown RBP12.6□□□□□ -0.39
RNF4-216ENST00000511859 TMEM134Q9H6X4 195 aa12.6□□□□□ -0.39
RNF4-216ENST00000511859 TBX20Q9UMR3 447 aa12.6□□□□□ -0.39
RNF4-216ENST00000511859 MTMR11A4FU01 709 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 CDC45O75419 566 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 MED24O75448 989 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 DDX6P26196 483 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNF4-216ENST00000511859 RPA1P27694 616 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 AVPR1AP37288 418 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 DPP6P42658 865 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 DHPSP49366 369 aaPredicted RBP12.59□□□□□ -0.39
RNF4-216ENST00000511859 CYP4F8P98187 520 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 BFSP1Q12934 665 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 SEMA3BQ13214 749 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 VEPH1Q14D04 833 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 PDGFRLQ15198 375 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 TRIM61Q5EBN2 209 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 TRIM68Q6AZZ1 485 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 ARMCX5Q6P1M9 558 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 CC2D1AQ6P1N0 951 aaPredicted RBP12.59□□□□□ -0.39
RNF4-216ENST00000511859 PIP4P1Q86T03 277 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 PIGKQ92643 395 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 SMG9Q9H0W8 520 aaKnown RBP12.59□□□□□ -0.39
RNF4-216ENST00000511859 KIF9Q9HAQ2 790 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 ZSWIM6Q9HCJ5 1215 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 BRMS1Q9HCU9 246 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 INVSQ9Y283 1065 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 TIMM13Q9Y5L4 95 aaPredicted RBP12.59□□□□□ -0.39
RNF4-216ENST00000511859 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
RNF4-216ENST00000511859 MYO18AQ92614 2054 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms