RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 B8ZZF3 427 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 ALDH1A2O94788 518 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 VNN2O95498 520 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 YWHABP31946 246 aaKnown RBP11.86□□□□□ -0.51
SNF8-207ENST00000509995 USP11P51784 963 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 CYP4F8P98187 520 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 CRY1Q16526 586 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 PFKFB3Q16875 520 aaPredicted RBP11.86□□□□□ -0.51
SNF8-207ENST00000509995 MAP7D1Q3KQU3 841 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 Q4G0T1 1027 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 SGMS1Q86VZ5 419 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 BEST2Q8NFU1 509 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 CCDC26Q8TAB7 109 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 USP33Q8TEY7 942 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 PRIMPOLQ96LW4 560 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 KIF2CQ99661 725 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 OSBPL3Q9H4L5 887 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 PDZD7Q9H5P4 517 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 MMP17Q9ULZ9 603 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 OBSL1O75147 1896 aa11.86□□□□□ -0.51
SNF8-207ENST00000509995 BSNQ9UPA5 3926 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 FAM149AA5PLN7 773 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 E9PAM4 449 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 EML1O00423 815 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 AP5Z1O43299 807 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 CYP4A11Q02928 519 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 TAF1BQ53T94 588 aaPredicted RBP11.85□□□□□ -0.51
SNF8-207ENST00000509995 C2orf27AQ580R0 203 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 APOA5Q6Q788 366 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 NOSTRINQ8IVI9 506 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 ETNPPLQ8TBG4 499 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 CCDC12Q8WUD4 166 aaPredicted RBP11.85□□□□□ -0.51
SNF8-207ENST00000509995 PSMG2Q969U7 264 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 PI4K2AQ9BTU6 479 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 LRRC2Q9BYS8 371 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 CRISPLD1Q9H336 500 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 CCL26Q9Y258 94 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 GDAQ9Y2T3 454 aa11.85□□□□□ -0.51
SNF8-207ENST00000509995 NOTCH2Q04721 2471 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 N4BP3O15049 544 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 RRP8O43159 456 aaKnown RBP11.84□□□□□ -0.51
SNF8-207ENST00000509995 TLX3O43711 291 aaPredicted RBP11.84□□□□□ -0.51
SNF8-207ENST00000509995 MARCH6O60337 910 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 P4HBP07237 508 aaKnown RBP11.84□□□□□ -0.51
SNF8-207ENST00000509995 HLA-EP13747 358 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 HNRNPLP14866 589 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNF8-207ENST00000509995 GLRA2P23416 452 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 GNA11P29992 359 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 ALDH1A3P47895 512 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 CSRP3P50461 194 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 SOX4Q06945 474 aaPredicted RBP11.84□□□□□ -0.51
SNF8-207ENST00000509995 RTN1Q16799 776 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 XKR9Q5GH70 373 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 SYNE3Q6ZMZ3 975 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 DNAJB7Q7Z6W7 309 aaPredicted RBP11.84□□□□□ -0.51
SNF8-207ENST00000509995 C4orf19Q8IY42 314 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 CMTM8Q8IZV2 173 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 CPA6Q8N4T0 437 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 SPRYD3Q8NCJ5 442 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 BAHD1Q8TBE0 780 aaPredicted RBP11.84□□□□□ -0.51
SNF8-207ENST00000509995 PGLYRP2Q96PD5 576 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 LXNQ9BS40 222 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 PRMT7Q9NVM4 692 aaPredicted RBP11.84□□□□□ -0.51
SNF8-207ENST00000509995 ASB3Q9Y575 518 aa11.84□□□□□ -0.51
SNF8-207ENST00000509995 CITO14578 2027 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 A0A1W2PQD8 194 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 PODXLO00592 558 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 SLC28A2O43868 658 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 TDP2O95551 362 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 ATXN1LP0C7T5 689 aaKnown RBP11.83□□□□□ -0.52
SNF8-207ENST00000509995 ARL2P36404 184 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 SEC13P55735 322 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 RPL6Q02878 288 aaKnown RBP11.83□□□□□ -0.52
SNF8-207ENST00000509995 DUSP4Q13115 394 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 PPP2R5CQ13362 524 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 BYSLQ13895 437 aaKnown RBP11.83□□□□□ -0.52
SNF8-207ENST00000509995 PDGFRLQ15198 375 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 CC2D1AQ6P1N0 951 aaPredicted RBP11.83□□□□□ -0.52
SNF8-207ENST00000509995 OTUD6AQ7L8S5 288 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 CCDC33Q8N5R6 958 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 RIN3Q8TB24 985 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 BICD2Q8TD16 824 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 NXPE2Q96DL1 559 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 WBP1Q96G27 269 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 SUSD3Q96L08 255 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 ADPGKQ9BRR6 497 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 SLC46A2Q9BY10 475 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 SEMA4CQ9C0C4 833 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 ECT2Q9H8V3 914 aa11.83□□□□□ -0.52
SNF8-207ENST00000509995 BCCIPQ9P287 314 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNF8-207ENST00000509995 MYO18AQ92614 2054 aaKnown RBP11.82□□□□□ -0.52
SNF8-207ENST00000509995 BOD1L1Q8NFC6 3051 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 ANTXRLA6NF34 631 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 K7EQS6 105 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 C6P13671 934 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 CDC25CP30307 473 aa11.82□□□□□ -0.52
SNF8-207ENST00000509995 AVPR1AP37288 418 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms