RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 SPC25Q9HBM1 224 aa9.64□□□□□ -0.87
SEC24D-209ENST00000509818 GDF3Q9NR23 364 aa9.64□□□□□ -0.87
SEC24D-209ENST00000509818 GEMIN8Q9NWZ8 242 aaKnown RBP9.64□□□□□ -0.87
SEC24D-209ENST00000509818 AGAP1Q9UPQ3 857 aa9.64□□□□□ -0.87
SEC24D-209ENST00000509818 MMP8P22894 467 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
SEC24D-209ENST00000509818 POLR2BP30876 1174 aaKnown RBP9.63□□□□□ -0.87
SEC24D-209ENST00000509818 CDH5P33151 784 aaPredicted RBP9.63□□□□□ -0.87
SEC24D-209ENST00000509818 CRYBB1P53674 252 aaPredicted RBP9.63□□□□□ -0.87
SEC24D-209ENST00000509818 RWDD2BP57060 319 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 GJA9P57773 515 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 PTP4A2Q12974 167 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 MAMLD1Q13495 774 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 HIC1Q14526 733 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 CASP8Q14790 479 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 SNX17Q15036 470 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 ZNF394Q53GI3 561 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 PLEKHA7Q6IQ23 1121 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 MMS22LQ6ZRQ5 1243 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 MAATS1Q7Z4T9 603 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 TRPV1Q8NER1 839 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 MTG1Q9BT17 334 aaPredicted RBP9.63□□□□□ -0.87
SEC24D-209ENST00000509818 LHX5Q9H2C1 402 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 VIPAS39Q9H9C1 493 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 EPB41L5Q9HCM4 733 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 PARVAQ9NVD7 372 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 PTPN22Q9Y2R2 807 aa9.63□□□□□ -0.87
SEC24D-209ENST00000509818 SART1O43290 800 aaKnown RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 RAD51CO43502 376 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 RPS6KA5O75582 802 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 GLI1P08151 1106 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 C6orf222P0C671 652 aaPredicted RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 CYBAP13498 195 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 HOXC8P31273 242 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 SSTR3P32745 418 aaPredicted RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 EPHB4P54760 987 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 MRPS25P82663 173 aaKnown RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 ZNF200P98182 395 aaPredicted RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 GUCY2DQ02846 1103 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 TAP1Q03518 808 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 MYO1EQ12965 1108 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 PAK2Q13177 524 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 ZNF211Q13398 564 aaPredicted RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 SMC1AQ14683 1233 aaKnown RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 GNASQ5JWF2 1037 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 TAF2Q6P1X5 1199 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 EMBQ6PCB8 327 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 EIF1ADQ8N9N8 165 aaKnown RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 BEST2Q8NFU1 509 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 FEZF2Q8TBJ5 459 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 AENQ8WTP8 325 aaKnown RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 KRT35Q92764 455 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 SNX27Q96L92 541 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 TRIM6Q9C030 488 aaPredicted RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 UPF3AQ9H1J1 476 aaKnown RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 SNTG2Q9NY99 539 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 CITO14578 2027 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 MYO1CO00159 1063 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 CILPO75339 1184 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 PROSCO94903 275 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 VDRP11473 427 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 ITGA4P13612 1032 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 CD19P15391 556 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 OAS2P29728 719 aaKnown RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 RAP1GAPP47736 663 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 RAD23BP54727 409 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 NKX3-2P78367 333 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 NNTQ13423 1086 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 ALKAL1Q6UXT8 129 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 PHLDB2Q86SQ0 1253 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 ERICH1Q86X53 443 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 PPP1R13LQ8WUF5 828 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 TFAP2BQ92481 460 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 TMEM176AQ96HP8 235 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 EIF2AQ9BY44 585 aaKnown RBP9.62□□□□□ -0.87
SEC24D-209ENST00000509818 FAM107BQ9H098 131 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 SDCBP2Q9H190 292 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 SMYD3Q9H7B4 428 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 IP6K2Q9UHH9 426 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 MTUS1Q9ULD2 1270 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 KIAA1257Q9ULG3 409 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 STRIP2Q9ULQ0 834 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 GABRQQ9UN88 632 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 PTCH2Q9Y6C5 1203 aa9.62□□□□□ -0.87
SEC24D-209ENST00000509818 M0QZ92 97 aa9.61□□□□□ -0.87
SEC24D-209ENST00000509818 TLR3O15455 904 aaKnown RBP9.61□□□□□ -0.87
SEC24D-209ENST00000509818 MYBL2P10244 700 aa9.61□□□□□ -0.87
SEC24D-209ENST00000509818 RARBP10826 455 aa9.61□□□□□ -0.87
SEC24D-209ENST00000509818 PYGMP11217 842 aa9.61□□□□□ -0.87
SEC24D-209ENST00000509818 MAN1A1P33908 653 aa9.61□□□□□ -0.87
SEC24D-209ENST00000509818 ACTN2P35609 894 aa9.61□□□□□ -0.87
SEC24D-209ENST00000509818 MARCKSL1P49006 195 aa9.61□□□□□ -0.87
SEC24D-209ENST00000509818 FLT3LGP49771 235 aa9.61□□□□□ -0.87
SEC24D-209ENST00000509818 CDH8P55286 799 aa9.61□□□□□ -0.87
SEC24D-209ENST00000509818 MLLT1Q03111 559 aaPredicted RBP9.61□□□□□ -0.87
SEC24D-209ENST00000509818 PTPN11Q06124 597 aaPredicted RBP9.61□□□□□ -0.87
SEC24D-209ENST00000509818 CUL1Q13616 776 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms