RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	GCGR	P47871	477 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	CASP5	P51878	434 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	CLLU1OS	Q5K130	101 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	DCLRE1A	Q6PJP8	1040 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	KCNT2	Q6UVM3	1135 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	ALKAL1	Q6UXT8	129 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	LRRC55	Q6ZSA7	311 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	CDR2L	Q86X02	465 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	C12orf56	Q8IXR9	622 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	SLC22A17	Q8WUG5	538 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	POMGNT1	Q8WZA1	660 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	DDX1	Q92499	740 aa	Known RBP	11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	THAP11	Q96EK4	314 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	ZBTB45	Q96K62	511 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	MSTO1	Q9BUK6	570 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	NXF3	Q9H4D5	531 aa	Known RBP	11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	PARP2	Q9UGN5	583 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	AGO2	Q9UKV8	859 aa	Known RBP	11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	ANKRD63	C9JTQ0	380 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	ST8SIA5	O15466	376 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	ALDH2	P05091	517 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	TH	P07101	528 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	ADSS	P30520	456 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	HOXD13	P35453	343 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	ALDH7A1	P49419	539 aa	Known RBP	11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	STARD6	P59095	220 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	RNASEL	Q05823	741 aa	Known RBP	11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	KCNA1	Q09470	495 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	STIM1	Q13586	685 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	LPAL2	Q16609	132 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	NFIL3	Q16649	462 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	SLC39A4	Q6P5W5	647 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	FOXR2	Q6PJQ5	311 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	PRR23C	Q6ZRP0	262 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	NT5DC4	Q86YG4	428 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	SLC9A9	Q8IVB4	645 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	HELQ	Q8TDG4	1101 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	LPP	Q93052	612 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	FAM193B	Q96PV7	902 aa	Predicted RBP	11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	RPS6KC1	Q96S38	1066 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	TMEM175	Q9BSA9	504 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	CLSTN2	Q9H4D0	955 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	ASB7	Q9H672	318 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	SLC38A7	Q9NVC3	462 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	TBC1D13	Q9NVG8	400 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	SNTG2	Q9NY99	539 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	ANKFY1	Q9P2R3	1169 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	TRAF3IP3	Q9Y228	551 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	USP20	Q9Y2K6	914 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	HES2	Q9Y543	173 aa		11.14	□□□□□ -0.63
PTPN20-222	ENST00000509774	SPAG17	Q6Q759	2223 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	TTC26	A0AVF1	554 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	MEIS3P2	A8K0S8	358 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	TM4SF5	O14894	197 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	TGFB1I1	O43294	461 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	XPOT	O43592	962 aa	Known RBP	11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	CALU	O43852	315 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	FAM189A1	O60320	539 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	LRP3	O75074	770 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	RECQL4	O94761	1208 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	KCNE1	P15382	129 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	AKAP5	P24588	427 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	PPM1A	P35813	382 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	KRT17	Q04695	432 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	GRIK3	Q13003	919 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	SURF1	Q15526	300 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	PTPN14	Q15678	1187 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	ARMCX5	Q6P1M9	558 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	TSSK4	Q6SA08	328 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	FAM160A2	Q8N612	972 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	KIAA0895	Q8NCT3	520 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	GSTCD	Q8NEC7	633 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	HPS3	Q969F9	1004 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	GAD1	Q99259	594 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	FGFBP2	Q9BYJ0	223 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	BCO2	Q9BYV7	579 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	NUP62CL	Q9H1M0	184 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	KCTD10	Q9H3F6	313 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	SFXN1	Q9H9B4	322 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	RPF1	Q9H9Y2	349 aa	Known RBP	11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	PRDM9	Q9NQV7	894 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	SEMA4G	Q9NTN9	838 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	SPG21	Q9NZD8	308 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	CNTN3	Q9P232	1028 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	CPSF3	Q9UKF6	684 aa	Known RBP	11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	GDA	Q9Y2T3	454 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	DERA	Q9Y315	318 aa		11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.13	□□□□□ -0.63
PTPN20-222	ENST00000509774	ZNF233	A6NK53	670 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	MAPK13	O15264	365 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	EXTL3	O43909	919 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	IL18RAP	O95256	599 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	CXCL14	O95715	111 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	CYP3A5	P20815	502 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	PAX3	P23760	479 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	RPL13	P26373	211 aa	Known RBP	11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	RPL9	P32969	192 aa	Known RBP	11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	MLH1	P40692	756 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	RPIA	P49247	311 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms