RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 PTPN14Q15678 1187 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 PRSS55Q6UWB4 352 aaPredicted RBP15.87■□□□□ 0.13
RNF4-213ENST00000509388 RRAGAQ7L523 313 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 LMO3Q8TAP4 145 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 SMYD3Q9H7B4 428 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 UBE2TQ9NPD8 197 aaPredicted RBP15.87■□□□□ 0.13
RNF4-213ENST00000509388 LMCD1Q9NZU5 365 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 APEX2Q9UBZ4 518 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 BACE2Q9Y5Z0 518 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 GBF1Q92538 1859 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 RANBP2P49792 3224 aaKnown RBP15.86■□□□□ 0.13
RNF4-213ENST00000509388 OR6C75A6NL08 312 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 FSCN2O14926 492 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 TEX33O43247 280 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 WARSP23381 471 aaKnown RBP15.86■□□□□ 0.13
RNF4-213ENST00000509388 KLRC2P26717 231 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 PCSK1P29120 753 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 RAP1GAPP47736 663 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 TSPY1Q01534 308 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 GCNT1Q02742 428 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 KCNMA1Q12791 1236 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 CAMK1Q14012 370 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 Q7L0L9 218 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 ENOSF1Q7L5Y1 443 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 DEFB123Q8N688 67 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 NEK11Q8NG66 645 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 MRPL45Q9BRJ2 306 aaKnown RBP15.86■□□□□ 0.13
RNF4-213ENST00000509388 TRIM5Q9C035 493 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 MTRRQ9UBK8 725 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 FBXL5Q9UKA1 691 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 IRAK3Q9Y616 596 aa15.86■□□□□ 0.13
RNF4-213ENST00000509388 PDCD11Q14690 1871 aaKnown RBP15.86■□□□□ 0.13
RNF4-213ENST00000509388 C2orf71A6NGG8 1288 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 HIDE1A8MVS5 230 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 ADH1AP07327 375 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 PDGFRBP09619 1106 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 RPL17P18621 184 aaKnown RBP15.85■□□□□ 0.13
RNF4-213ENST00000509388 OR1D2P34982 312 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 NDUFV1P49821 464 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 MRPL58Q14197 206 aaKnown RBP15.85■□□□□ 0.13
RNF4-213ENST00000509388 KLHDC7AQ5VTJ3 777 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 PHLDB3Q6NSJ2 640 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 GLYCTKQ8IVS8 523 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 ARHGEF19Q8IW93 802 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 DCP1BQ8IZD4 617 aaKnown RBP15.85■□□□□ 0.13
RNF4-213ENST00000509388 KBTBD7Q8WVZ9 684 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 KLHL5Q96PQ7 755 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 ERGIC2Q96RQ1 377 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 ACBD6Q9BR61 282 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 BCO2Q9BYV7 579 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 XPO4Q9C0E2 1151 aaKnown RBP15.85■□□□□ 0.13
RNF4-213ENST00000509388 FAM124BQ9H5Z6 455 aaPredicted RBP15.85■□□□□ 0.13
RNF4-213ENST00000509388 NSUN3Q9H649 340 aaKnown RBP15.85■□□□□ 0.13
RNF4-213ENST00000509388 TLE6Q9H808 572 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 RXFP1Q9HBX9 757 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 PLCB1Q9NQ66 1216 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 CISHQ9NSE2 258 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 FAM207AQ9NSI2 230 aaPredicted RBP15.85■□□□□ 0.13
RNF4-213ENST00000509388 FNIP2Q9P278 1114 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 DNAJC12Q9UKB3 198 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 CDY1Q9Y6F8 540 aa15.85■□□□□ 0.13
RNF4-213ENST00000509388 A0A1W2PQC6 194 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 GABRDO14764 452 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 TEX28O15482 410 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 LILRB3O75022 631 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 CNPP09543 421 aaKnown RBP15.84■□□□□ 0.13
RNF4-213ENST00000509388 CPB1P15086 417 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 RFX1P22670 979 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 ACAT1P24752 427 aaKnown RBP15.84■□□□□ 0.13
RNF4-213ENST00000509388 FXR1P51114 621 aaKnown RBP eCLIP15.84■□□□□ 0.13
RNF4-213ENST00000509388 ARHGAP44Q17R89 818 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 LIMS2Q7Z4I7 341 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 RBM23Q86U06 439 aaKnown RBP15.84■□□□□ 0.13
RNF4-213ENST00000509388 PPFIBP1Q86W92 1011 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 UNC93AQ86WB7 457 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 OSTM1Q86WC4 334 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 JAKMIP2Q96AA8 810 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 TNIP3Q96KP6 325 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 CDX2Q99626 313 aaPredicted RBP15.84■□□□□ 0.13
RNF4-213ENST00000509388 ARID3AQ99856 593 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 CLSTN3Q9BQT9 956 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 SDCBP2Q9H190 292 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 CDH9Q9ULB4 789 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 BARX2Q9UMQ3 279 aaPredicted RBP15.84■□□□□ 0.13
RNF4-213ENST00000509388 STXBP5LQ9Y2K9 1186 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 PCDHB4Q9Y5E5 795 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 PCDHGC5Q9Y5F6 944 aa15.84■□□□□ 0.13
RNF4-213ENST00000509388 KRT5P13647 590 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 LMO2P25791 158 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 USP8P40818 1118 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 KLK7P49862 253 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 NDST1P52848 882 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 APBA1Q02410 837 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 RAPGEF1Q13905 1077 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 MAPRE1Q15691 268 aaKnown RBP15.83■□□□□ 0.12
RNF4-213ENST00000509388 ZNF394Q53GI3 561 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 SLC8B1Q6J4K2 584 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 GJB7Q6PEY0 223 aa15.83■□□□□ 0.12
RNF4-213ENST00000509388 SARM1Q6SZW1 724 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms