RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 ARID5AQ03989 594 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 BTG3Q14201 252 aaPredicted RBP11.08□□□□□ -0.64
RFC1-211ENST00000509084 BMS1Q14692 1282 aaKnown RBP11.08□□□□□ -0.64
RFC1-211ENST00000509084 STILQ15468 1287 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 PAN2Q504Q3 1202 aaKnown RBP11.08□□□□□ -0.64
RFC1-211ENST00000509084 E4F1Q66K89 784 aaPredicted RBP11.08□□□□□ -0.64
RFC1-211ENST00000509084 HGSNATQ68CP4 663 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 SCARA3Q6AZY7 606 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 PPP1R2P3Q6NXS1 205 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 LIMS2Q7Z4I7 341 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 ADGRF2Q8IZF7 708 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 TXLNBQ8N3L3 684 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 EPS8L1Q8TE68 723 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 SUSD3Q96L08 255 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 SENP8Q96LD8 212 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 NT5C1AQ9BXI3 368 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 SNX25Q9H3E2 840 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 KCNF1Q9H3M0 494 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 HAUS4Q9H6D7 363 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 NHEJ1Q9H9Q4 299 aaPredicted RBP11.08□□□□□ -0.64
RFC1-211ENST00000509084 LUC7LQ9NQ29 371 aaKnown RBP11.08□□□□□ -0.64
RFC1-211ENST00000509084 AAASQ9NRG9 546 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 ARHGAP20Q9P2F6 1191 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 STK39Q9UEW8 545 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 ADAM28Q9UKQ2 775 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 KIAA1257Q9ULG3 409 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 INSL6Q9Y581 213 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.648e-14■■■■■ 114.9
RFC1-211ENST00000509084 SCN1AP35498 2009 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 NRP1O14786 923 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 SYN3O14994 580 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 SPTLC1O15269 473 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 CCP110O43303 1012 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 MED7O43513 233 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 TADA2AO75478 443 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 GALTP07902 379 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 PNMA6AP0CW24 399 aaPredicted RBP11.07□□□□□ -0.64
RFC1-211ENST00000509084 CYP11B1P15538 503 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 TYMPP19971 482 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 GNA15P30679 374 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 CLCN1P35523 988 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 PPM1AP35813 382 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 EIF4A3P38919 411 aaKnown RBP11.07□□□□□ -0.64
RFC1-211ENST00000509084 RAP1GAPP47736 663 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 SLC11A1P49279 550 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 ALDH7A1P49419 539 aaKnown RBP11.07□□□□□ -0.64
RFC1-211ENST00000509084 KIF11P52732 1056 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 NDST1P52848 882 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 EPHB4P54760 987 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 SOWAHAQ2M3V2 549 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 TIGD5Q53EQ6 642 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 SPOUT1Q5T280 376 aaKnown RBP11.07□□□□□ -0.64
RFC1-211ENST00000509084 TRIM72Q6ZMU5 477 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 TMEM130Q8N3G9 435 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 PDCL2Q8N4E4 241 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 C3orf58Q8NDZ4 430 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 OR6B3Q8NGW1 331 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 ELMO3Q96BJ8 720 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 TMEM176AQ96HP8 235 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 TNIP3Q96KP6 325 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 ZNF558Q96NG5 402 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 PAAF1Q9BRP4 392 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 SDCBP2Q9H190 292 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 DNAJB4Q9UDY4 337 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 L1RE1Q9UN81 338 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 ZKSCAN5Q9Y2L8 839 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 PRG3Q9Y2Y8 225 aaPredicted RBP11.07□□□□□ -0.64
RFC1-211ENST00000509084 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.07□□□□□ -0.64
RFC1-211ENST00000509084 ATP8B3O60423 1300 aa11.07□□□□□ -0.64
RFC1-211ENST00000509084 SOWAHDA6NJG2 315 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 A8MXQ7 604 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 EIF3CLB5ME19 914 aaKnown RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 RBAK-RBAKDNI3L0D1 243 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 GABRDO14764 452 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 B4GALT3O60512 393 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 NDUFA10O95299 355 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 VDRP11473 427 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 ATP2A2P16615 1042 aaKnown RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 TNFAIP3P21580 790 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 PCSK1P29120 753 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 GNL1P36915 607 aaPredicted RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 CDH8P55286 799 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 BCAR1P56945 870 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 KRT83P78385 493 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 CDR2Q01850 454 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 SPA17Q15506 151 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 SLC18A3Q16572 532 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 C10orf76Q5T2E6 689 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 RASIP1Q5U651 963 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 HERC6Q8IVU3 1022 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 THEM5Q8N1Q8 247 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 FIBCD1Q8N539 461 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 KBTBD7Q8WVZ9 684 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 ZNF830Q96NB3 372 aaPredicted RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 EIF3CQ99613 913 aaKnown RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 RAD9AQ99638 391 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 CHP1Q99653 195 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 AGPAT1Q99943 283 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms