RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 GNA15P30679 374 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 CYLC1P35663 651 aaPredicted RBP15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 KIF11P52732 1056 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 RAD23BP54727 409 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 BCAR1P56945 870 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 ASTE1Q2TB18 679 aaPredicted RBP15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 TAF3Q5VWG9 929 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 WSCD1Q658N2 575 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 SMYD5Q6GMV2 418 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 TOGARAM2Q6ZUX3 1019 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 ELOVL4Q9GZR5 314 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 SPTLC3Q9NUV7 552 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 ZKSCAN5Q9Y2L8 839 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 TIMM13Q9Y5L4 95 aaPredicted RBP15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 SLC4A7Q9Y6M7 1214 aa15.82■□□□□ 0.12
SNCAIP-211ENST00000509023 NT5C1B-RDH14C9J2C7 533 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 M0QZQ0 153 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 TADA2AO75478 443 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 NDUFA10O95299 355 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 ODC1P11926 461 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 VPS36Q86VN1 386 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 SLC4A11Q8NBS3 891 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 TMEM176AQ96HP8 235 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 SUSD3Q96L08 255 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 SLC9A7Q96T83 725 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 AGPAT1Q99943 283 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 SYT11Q9BT88 431 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 COLEC11Q9BWP8 271 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 NT5C1AQ9BXI3 368 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 MTIF3Q9H2K0 278 aaKnown RBP15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 SNX25Q9H3E2 840 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 MARCH5Q9NX47 278 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 ADAMTS1Q9UHI8 967 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 PUF60Q9UHX1 559 aaKnown RBP15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 ADAM28Q9UKQ2 775 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 NME7Q9Y5B8 376 aa15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 EPN1Q9Y6I3 576 aaPredicted RBP15.81■□□□□ 0.12
SNCAIP-211ENST00000509023 WARSP23381 471 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 GNL1P36915 607 aaPredicted RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 MAGEA10P43363 369 aaPredicted RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 ALDH7A1P49419 539 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 GFPT1Q06210 699 aaPredicted RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 SPOUT1Q5T280 376 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 UNC93AQ86WB7 457 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 TMEM86AQ8N2M4 240 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 OLIG1Q8TAK6 271 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 DDX1Q92499 740 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 DESI2Q9BSY9 194 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 ZBED2Q9BTP6 218 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 SEPT11Q9NVA2 429 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 TSC2P49815 1807 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 A8MXQ7 604 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 THAP12O43422 761 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 HCRTO43612 131 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 MMEP08473 750 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 PAEPP09466 180 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 FAM163BP0C2L3 166 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 ATP2A2P16615 1042 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 TNFAIP3P21580 790 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 LMO2P25791 158 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 ANXA13P27216 316 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 HTRA4P83105 476 aaPredicted RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 CDR2Q01850 454 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 BMS1Q14692 1282 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 OSTM1Q86WC4 334 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 TMEM173Q86WV6 379 aaPredicted RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 GLYCTKQ8IVS8 523 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 HERC6Q8IVU3 1022 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 LNX1Q8TBB1 728 aaPredicted RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 PHOSPHO2Q8TCD6 241 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 STXBP5LQ9Y2K9 1186 aa15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 MRPL42Q9Y6G3 142 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-211ENST00000509023 A0A087X0T9 212 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 ARHGEF37A1IGU5 675 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 EIF3CLB5ME19 914 aaKnown RBP15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 DDX3XO00571 662 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 GABRDO14764 452 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 TRAPPC3O43617 180 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 PDGFRBP09619 1106 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 FAM228BP0C875 321 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 CD19P15391 556 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 CHRNB2P17787 502 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 BRD2P25440 801 aaKnown RBP15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 FMO1Q01740 532 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 SLC18A3Q16572 532 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 ZNF677Q86XU0 584 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 ACRBPQ8NEB7 543 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 HEXIM2Q96MH2 286 aaKnown RBP15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 EIF3CQ99613 913 aaKnown RBP15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 DPEP3Q9H4B8 488 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 DSEQ9UL01 958 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 PCDHB8Q9UN66 801 aa15.79■□□□□ 0.12
SNCAIP-211ENST00000509023 CYP11A1P05108 521 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 LHX1P48742 406 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 CYP27A1Q02318 531 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 C9orf50Q5SZB4 431 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 RASIP1Q5U651 963 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 ACOT1Q86TX2 421 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 METTL23Q86XA0 190 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms