RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 ZNF560Q96MR9 790 aa23.82■■□□□ 1.4
PACRGL-220ENST00000508952 LRRC3Q9BY71 257 aa23.82■■□□□ 1.4
PACRGL-220ENST00000508952 ZCWPW1Q9H0M4 648 aa23.82■■□□□ 1.4
PACRGL-220ENST00000508952 PDE11AQ9HCR9 933 aa23.82■■□□□ 1.4
PACRGL-220ENST00000508952 AGAP1Q9UPQ3 857 aa23.82■■□□□ 1.4
PACRGL-220ENST00000508952 SIT1Q9Y3P8 196 aa23.82■■□□□ 1.4
PACRGL-220ENST00000508952 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.81■■□□□ 1.4
PACRGL-220ENST00000508952 ALDH1A3P47895 512 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 STARD6P59095 220 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 GRM2Q14416 872 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 TEAD2Q15562 447 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 MLF2Q15773 248 aaPredicted RBP23.81■■□□□ 1.4
PACRGL-220ENST00000508952 SLC44A4Q53GD3 710 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 TMC8Q8IU68 726 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 GPD1LQ8N335 351 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 LEMD2Q8NC56 503 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 SHDQ96IW2 340 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 ASB16Q96NS5 453 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 C7orf25Q9BPX7 421 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 BLZF1Q9H2G9 400 aa23.81■■□□□ 1.4
PACRGL-220ENST00000508952 LRRN2O75325 713 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 PFKPQ01813 784 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 ANGPT1Q15389 498 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 FAM26FQ5R3K3 315 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 RESP18Q5W5W9 173 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 LMBRD2Q68DH5 695 aaPredicted RBP23.8■■□□□ 1.4
PACRGL-220ENST00000508952 CNNM4Q6P4Q7 775 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 THEM5Q8N1Q8 247 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 PJA1Q8NG27 643 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 CACTINQ8WUQ7 758 aaKnown RBP23.8■■□□□ 1.4
PACRGL-220ENST00000508952 SMARCD2Q92925 531 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 ZFP14Q9HCL3 533 aa23.8■■□□□ 1.4
PACRGL-220ENST00000508952 ZNF334Q9HCZ1 680 aaPredicted RBP23.8■■□□□ 1.4
PACRGL-220ENST00000508952 A0A1W2PRU2 124 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 PNPLA4P41247 253 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 ATL3Q6DD88 541 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 EPM2AIP1Q7L775 607 aaPredicted RBP23.79■■□□□ 1.4
PACRGL-220ENST00000508952 LRRTM3Q86VH5 581 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 CSGALNACT2Q8N6G5 542 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 CXorf38Q8TB03 319 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 SEPT5Q99719 369 aaPredicted RBP23.79■■□□□ 1.4
PACRGL-220ENST00000508952 MTMR12Q9C0I1 747 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 SLITRK6Q9H5Y7 841 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 MAGEF1Q9HAY2 307 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 FAM13BQ9NYF5 915 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 HSPBP1Q9NZL4 362 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 DLGAP2Q9P1A6 1054 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 PTPRJQ12913 1337 aa23.79■■□□□ 1.4
PACRGL-220ENST00000508952 EIF3DO15371 548 aaKnown RBP eCLIP23.78■■□□□ 1.4
PACRGL-220ENST00000508952 KRT19P08727 400 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 GLULP15104 373 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 CD72P21854 359 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 VIPR2P41587 438 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 BFSP1Q12934 665 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 DNAJB7Q7Z6W7 309 aaPredicted RBP23.78■■□□□ 1.4
PACRGL-220ENST00000508952 CBWD2Q8IUF1 395 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 ZSCAN18Q8TBC5 510 aaPredicted RBP23.78■■□□□ 1.4
PACRGL-220ENST00000508952 LPIN3Q9BQK8 851 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 DDX23Q9BUQ8 820 aaKnown RBP23.78■■□□□ 1.4
PACRGL-220ENST00000508952 HSFX1Q9UBD0 423 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 SIX4Q9UIU6 781 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 ITGA11Q9UKX5 1188 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 CFAP45Q9UL16 551 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 L1RE1Q9UN81 338 aa23.78■■□□□ 1.4
PACRGL-220ENST00000508952 TICRRQ7Z2Z1 1910 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 KANSL1LA0AUZ9 987 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 KIAA0391O15091 583 aaKnown RBP23.77■■□□□ 1.4
PACRGL-220ENST00000508952 GFRA3O60609 400 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 TMEM191BP0C7N4 346 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 ATF6P18850 670 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 NBL1P41271 181 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 AFMP43652 599 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 PRKCQQ04759 706 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 MGAT5BQ3V5L5 792 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 STXBP5Q5T5C0 1151 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 VITQ6UXI7 678 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 UNC13DQ70J99 1090 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 FRMD5Q7Z6J6 570 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 NELFCDQ8IXH7 590 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 GRAMD1CQ8IYS0 662 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 PDCL2Q8N4E4 241 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 ZNF507Q8TCN5 953 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 FAM200AQ8TCP9 573 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 PSMG2Q969U7 264 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 CHAMP1Q96JM3 812 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 HEBP1Q9NRV9 189 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 ABI2Q9NYB9 513 aaPredicted RBP23.77■■□□□ 1.4
PACRGL-220ENST00000508952 RCOR1Q9UKL0 485 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 MTF2Q9Y483 593 aaPredicted RBP23.77■■□□□ 1.4
PACRGL-220ENST00000508952 ASB3Q9Y575 518 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 NCANO14594 1321 aa23.77■■□□□ 1.4
PACRGL-220ENST00000508952 COL4A2P08572 1712 aa23.76■■□□□ 1.39
PACRGL-220ENST00000508952 ZNF233A6NK53 670 aa23.76■■□□□ 1.39
PACRGL-220ENST00000508952 TUFMP49411 452 aaKnown RBP23.76■■□□□ 1.39
PACRGL-220ENST00000508952 EHHADHQ08426 723 aa23.76■■□□□ 1.39
PACRGL-220ENST00000508952 CUL4BQ13620 913 aa23.76■■□□□ 1.39
PACRGL-220ENST00000508952 UBXN2BQ14CS0 331 aa23.76■■□□□ 1.39
PACRGL-220ENST00000508952 TPRG1Q6ZUI0 275 aa23.76■■□□□ 1.39
PACRGL-220ENST00000508952 GAREM2Q75VX8 874 aa23.76■■□□□ 1.39
PACRGL-220ENST00000508952 LRRC52Q8N7C0 313 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms