RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PREPLQ4J6C6 727 aaPredicted RBP6.44□□□□□ -1.38
DHFR-204ENST00000508282 B3GNT9Q6UX72 402 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 TSHZ1Q6ZSZ6 1077 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 PPP1R32Q7Z5V6 425 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 PSD4Q8NDX1 1056 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 PLBD2Q8NHP8 589 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 SNX19Q92543 992 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 CDK5RAP3Q96JB5 506 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 LRGUKQ96M69 825 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 CNPPD1Q9BV87 410 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 SMOC2Q9H3U7 446 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 PRDM13Q9H4Q3 707 aa6.44□□□□□ -1.38
DHFR-204ENST00000508282 ZAR1LA6NP61 321 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 YY2O15391 372 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 PEX1O43933 1283 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 FOLR3P41439 243 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 TOB1P50616 345 aaPredicted RBP6.43□□□□□ -1.38
DHFR-204ENST00000508282 SIM1P81133 766 aaPredicted RBP6.43□□□□□ -1.38
DHFR-204ENST00000508282 EXOSC9Q06265 439 aaKnown RBP6.43□□□□□ -1.38
DHFR-204ENST00000508282 KIAA0895LQ68EN5 471 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 TAF2Q6P1X5 1199 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 EPM2AIP1Q7L775 607 aaPredicted RBP6.43□□□□□ -1.38
DHFR-204ENST00000508282 USP37Q86T82 979 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 DNAJC10Q8IXB1 793 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 CELF5Q8N6W0 485 aaKnown RBP6.43□□□□□ -1.38
DHFR-204ENST00000508282 SIMC1Q8NDZ2 872 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 KLHDC4Q8TBB5 520 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 ACTRT2Q8TDY3 377 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 PDLIM2Q96JY6 352 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 TAAR9Q96RI9 348 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 RIOX1Q9H6W3 641 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 ARMT1Q9H993 441 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 NMRK2Q9NPI5 230 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 ANLNQ9NQW6 1124 aa6.43□□□□□ -1.38
DHFR-204ENST00000508282 MGST3O14880 152 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 VPS4BO75351 444 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 GNAI2P04899 355 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 PPP3CBP16298 524 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 HSPA6P17066 643 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 HDCP19113 662 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 CHRM3P20309 590 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 IL12RB1P42701 662 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 NPTX2P47972 431 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 HNRNPMP52272 730 aaKnown RBP eCLIP6.42□□□□□ -1.38
DHFR-204ENST00000508282 EMC10Q5UCC4 262 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 FAM9AQ8IZU1 332 aaPredicted RBP6.42□□□□□ -1.38
DHFR-204ENST00000508282 PPP1R35Q8TAP8 253 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 SLC35G2Q8TBE7 412 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 MYCBPAPQ8TBZ2 947 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 BRIX1Q8TDN6 353 aaKnown RBP6.42□□□□□ -1.38
DHFR-204ENST00000508282 LRIT1Q9P2V4 623 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 PCDHA6Q9UN73 950 aa6.42□□□□□ -1.38
DHFR-204ENST00000508282 H3BML4 177 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 M0QYG6 137 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 RARRES1P49788 294 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 GTF2H3Q13889 308 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 BOP1Q14137 746 aaKnown RBP6.41□□□□□ -1.38
DHFR-204ENST00000508282 LRRC41Q15345 812 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 ERCC6LQ2NKX8 1250 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 DENND1CQ8IV53 801 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 CAMKK1Q8N5S9 505 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 ACO2Q99798 780 aaKnown RBP6.41□□□□□ -1.38
DHFR-204ENST00000508282 LRFN3Q9BTN0 628 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 SIK2Q9H0K1 926 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 RSAD1Q9HA92 442 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 GABBR1Q9UBS5 961 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 SPATA31A3Q5VYP0 1347 aa6.41□□□□□ -1.38
DHFR-204ENST00000508282 A0A0B4J269 797 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 MPPED1O15442 326 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 PIM1P11309 404 aaPredicted RBP6.4□□□□□ -1.38
DHFR-204ENST00000508282 HTR1BP28222 390 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 PTH2RP49190 550 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 NDUFV1P49821 464 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 SOX8P57073 446 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 RAB1AP62820 205 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 TUBB3Q13509 450 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 NFE2Q16621 373 aaPredicted RBP6.4□□□□□ -1.38
DHFR-204ENST00000508282 KHDC1LQ5JSQ8 128 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 ZNF362Q5T0B9 420 aaPredicted RBP6.4□□□□□ -1.38
DHFR-204ENST00000508282 PRIMA1Q86XR5 153 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 TOR1AIP2Q8NFQ8 470 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 DDX17Q92841 729 aaKnown RBP6.4□□□□□ -1.38
DHFR-204ENST00000508282 MTFMTQ96DP5 389 aaKnown RBP6.4□□□□□ -1.38
DHFR-204ENST00000508282 FBXL20Q96IG2 436 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 CRAMP1Q96RY5 1269 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 INSL6Q9Y581 213 aa6.4□□□□□ -1.38
DHFR-204ENST00000508282 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 F5H697 171 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 PRPF3O43395 683 aaKnown RBP6.39□□□□□ -1.39
DHFR-204ENST00000508282 DNAJB5O75953 348 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 UBXN7O94888 489 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 S100BP04271 92 aaPredicted RBP6.39□□□□□ -1.39
DHFR-204ENST00000508282 STRIP1Q5VSL9 837 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 FAM160B1Q5W0V3 765 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 PCSK9Q8NBP7 692 aaKnown RBP6.39□□□□□ -1.39
DHFR-204ENST00000508282 ZBTB34Q8NCN2 500 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 FAM46DQ8NEK8 389 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 CAGE1Q8TC20 777 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 TFAP2BQ92481 460 aa6.39□□□□□ -1.39
DHFR-204ENST00000508282 PGBD1Q96JS3 809 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms