RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PSMC6P62333 389 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 KRT17Q04695 432 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 PRKCZQ05513 592 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 FAAP100Q0VG06 881 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 RALGDSQ12967 914 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 SLC12A1Q13621 1099 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 PDCD1Q15116 288 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 SEC23AQ15436 765 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 TRADDQ15628 312 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 TBCEQ15813 527 aaPredicted RBP8□□□□□ -1.13
PDGFRA-206ENST00000508170 CFAP221Q4G0U5 840 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 FYB2Q5VWT5 728 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 CREB3L3Q68CJ9 461 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 LRIG3Q6UXM1 1119 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 MAMDC2Q7Z304 686 aaPredicted RBP8□□□□□ -1.13
PDGFRA-206ENST00000508170 PXKQ7Z7A4 578 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 TMEM200AQ86VY9 491 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 MAML2Q8IZL2 1156 aaPredicted RBP8□□□□□ -1.13
PDGFRA-206ENST00000508170 HDDC3Q8N4P3 179 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 TRIM58Q8NG06 486 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 METTL21AQ8WXB1 218 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 GBP5Q96PP8 586 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 COLEC11Q9BWP8 271 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 FANCEQ9HB96 536 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 PARVGQ9HBI0 331 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 DNAJC28Q9NX36 388 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 GMIPQ9P107 970 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 WHRNQ9P202 907 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 B4GALT6Q9UBX8 382 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 PRELID1Q9Y255 219 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 STXBP5LQ9Y2K9 1186 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 PCDHGA1Q9Y5H4 931 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 IRS2Q9Y4H2 1338 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 GAPVD1Q14C86 1478 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 GOLGA6L7A0A1B0GV03 622 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 A8MXE2 369 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 TBC1D4O60343 1298 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 EXOC3O60645 756 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 NUDT7P0C024 238 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 IL10P22301 178 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 GRIA4P48058 902 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 NT5C2P49902 561 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 PLTPP55058 493 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 HAND2P61296 217 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 LAMB3Q13751 1172 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 SF1Q15637 639 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 TCTE1Q5JU00 501 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 CDCP2Q5VXM1 449 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 TUSC5Q8IXB3 177 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 C17orf53Q8N3J3 647 aaPredicted RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 EFHBQ8N7U6 833 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 FIBINQ8TAL6 211 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 STYXQ8WUJ0 223 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 WASF1Q92558 559 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 ADAD1Q96M93 576 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 SIN3AQ96ST3 1273 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 ZCCHC2Q9C0B9 1178 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 C8orf33Q9H7E9 229 aaPredicted RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 C14orf93Q9H972 538 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 CABP5Q9NP86 173 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 TMEM39AQ9NV64 488 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 ATAD3AQ9NVI7 634 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 WBP1LQ9NX94 342 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 GPN3Q9UHW5 284 aaPredicted RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 KLHL20Q9Y2M5 609 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 COQ6Q9Y2Z9 468 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 FGD6Q6ZV73 1430 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 TARBP1Q13395 1621 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 PTGES3LE9PB15 166 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 H0YIV9 168 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 ACTN4O43707 911 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 GCNT3O95395 438 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 PNPP00491 289 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 EDN3P14138 238 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 ADSSP30520 456 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 ADRA1BP35368 520 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 OR1G1P47890 313 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 ARCN1P48444 511 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 PTPN11Q06124 597 aaPredicted RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 EPS8Q12929 822 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 MAMLD1Q13495 774 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 DOC2AQ14183 400 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 HADHQ16836 314 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 METTL23Q86XA0 190 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 WDR63Q8IWG1 891 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 NIPA2Q8N8Q9 360 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 IFI44Q8TCB0 444 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 CUL5Q93034 780 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 NCLNQ969V3 563 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 PDLIM5Q96HC4 596 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 PLEKHG4BQ96PX9 1271 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 SMARCAD1Q9H4L7 1026 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 COX16Q9P0S2 106 aa7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 SEPT9Q9UHD8 586 aaPredicted RBP7.99□□□□□ -1.13
PDGFRA-206ENST00000508170 RNF103-CHMP3A0A140T963 221 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 hCG_1809904A0A1W2PP81 198 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 A0A1W2PPE2 198 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 A0A1W2PR64 198 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 RNF103O00237 685 aa7.98□□□□□ -1.13
PDGFRA-206ENST00000508170 TNFRSF10CO14798 259 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms