RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 ENGASEQ8NFI3 743 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 SNRNP27Q8WVK2 155 aaKnown RBP8.47□□□□□ -1.05
CLDND1-214ENST00000507411 TSC1Q92574 1164 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 GPATCH3Q96I76 525 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 TBC1D32Q96NH3 1257 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 SPSB2Q99619 263 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 FAM124BQ9H5Z6 455 aaPredicted RBP8.47□□□□□ -1.05
CLDND1-214ENST00000507411 GPRC5CQ9NQ84 441 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 NRBP2Q9NSY0 501 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 CEP72Q9P209 647 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 GABBR1Q9UBS5 961 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 SUSD2Q9UGT4 822 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 MMP17Q9ULZ9 603 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 GIT1Q9Y2X7 761 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 HES2Q9Y543 173 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 BACE2Q9Y5Z0 518 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 CRYBG3Q68DQ2 2970 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 MYO16Q9Y6X6 1858 aa8.47□□□□□ -1.05
CLDND1-214ENST00000507411 OTOL1A6NHN0 477 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 CASTOR2A6NHX0 329 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 SEC24AO95486 1093 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 CER1O95813 267 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 PRKCBP05771 671 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 PSAPP07602 524 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 ATF2P15336 505 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 FGFR3P22607 806 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 HOXA11P31270 313 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 ARPP19P56211 112 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 PTH1RQ03431 593 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 FUT2Q10981 343 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 TWF1Q12792 350 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 TUSC3Q13454 348 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 SART3Q15020 963 aaKnown RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 UBE2SQ16763 222 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 IFIT1BQ5T764 474 aaKnown RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 TSHZ3Q63HK5 1081 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 NAIF1Q69YI7 327 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 ANKS3Q6ZW76 656 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 FTSJ3Q8IY81 847 aaKnown RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 HACE1Q8IYU2 909 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 TRMT2AQ8IZ69 625 aaKnown RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 RGL4Q8IZJ4 473 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 PGBD3Q8N328 593 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 CCDC33Q8N5R6 958 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 EXD3Q8N9H8 876 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 USP33Q8TEY7 942 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 SLC7A3Q8WY07 619 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 EZH1Q92800 747 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 HSPA12BQ96MM6 686 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 EBF3Q9H4W6 596 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 GAREM1Q9H706 876 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 PSTPIP2Q9H939 334 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 IL21RQ9HBE5 538 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 HPS4Q9NQG7 708 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 STARD5Q9NSY2 213 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 SUCLA2Q9P2R7 463 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 PCDHA6Q9UN73 950 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 PCDHA8Q9Y5H6 950 aa8.46□□□□□ -1.06
CLDND1-214ENST00000507411 NUP210Q8TEM1 1887 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-214ENST00000507411 CYTH3O43739 400 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 CILPO75339 1184 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 ABLIM3O94929 683 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 PRAMEF12O95522 483 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 SREBF1P36956 1147 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 MATKP42679 507 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 NT5C2P49902 561 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 SEC13P55735 322 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 CLDN6P56747 220 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 SCRN1Q12765 414 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 CEP55Q53EZ4 464 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 ZKSCAN2Q63HK3 967 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 TRIM68Q6AZZ1 485 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 KSR1Q8IVT5 923 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 TRIML1Q8N9V2 468 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 GSTCDQ8NEC7 633 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 HMGB4Q8WW32 186 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 CD101Q93033 1021 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 FAM83CQ9BQN1 747 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 UBAC1Q9BSL1 405 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 POLR3CQ9BUI4 534 aaPredicted RBP8.45□□□□□ -1.06
CLDND1-214ENST00000507411 EIF2AQ9BY44 585 aaKnown RBP8.45□□□□□ -1.06
CLDND1-214ENST00000507411 BTBD3Q9Y2F9 522 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 FNDC3AQ9Y2H6 1198 aaKnown RBP8.45□□□□□ -1.06
CLDND1-214ENST00000507411 PCDHGB2Q9Y5G2 931 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 SPG11Q96JI7 2443 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
CLDND1-214ENST00000507411 ADGRG4Q8IZF6 3080 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 ANO9A1A5B4 782 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 KLK10O43240 276 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 ARSAP15289 507 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 AFMP43652 599 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 PRKCEQ02156 737 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 SUZ12Q15022 739 aaKnown RBP8.44□□□□□ -1.06
CLDND1-214ENST00000507411 ARHGAP15Q53QZ3 475 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 SYCP2LQ5T4T6 812 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 GPR158Q5T848 1215 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 SLC8B1Q6J4K2 584 aa8.44□□□□□ -1.06
CLDND1-214ENST00000507411 USP49Q70CQ1 688 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms