RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 PDXDC1Q6P996 788 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 BLOC1S2Q6QNY1 142 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 ARMCX6Q7L4S7 300 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 OTUD6AQ7L8S5 288 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 TAS1R3Q7RTX0 852 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 FRMD1Q8N878 549 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 OR2I1PQ8NGU4 316 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 KCNB2Q92953 911 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 TNFRSF25Q93038 417 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 CRELD1Q96HD1 420 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 CCDC43Q96MW1 224 aaKnown RBP9.77□□□□□ -0.85
COPS4-205ENST00000507376 TMEM60Q9H2L4 133 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 VPS45Q9NRW7 570 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 PLXNB3Q9ULL4 1909 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 PCNX2A6NKB5 2137 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 PI4KAP42356 2102 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 PCDH15Q96QU1 1955 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 BCLAF3A2AJT9 711 aaKnown RBP9.76□□□□□ -0.85
COPS4-205ENST00000507376 ABLIM1O14639 778 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 ZNF197O14709 1029 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 DKC1O60832 514 aaKnown RBP eCLIP9.76□□□□□ -0.85
COPS4-205ENST00000507376 MICAL2O94851 1124 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 LYPLA2O95372 231 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 HNRNPLP14866 589 aaKnown RBP eCLIP9.76□□□□□ -0.85
COPS4-205ENST00000507376 HOXA6P31267 233 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 MCM4P33991 863 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 GPR158Q5T848 1215 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 ATF7IP2Q5U623 682 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 PPP4R3AQ6IN85 833 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 ZNF280DQ6N043 979 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 RALGPS2Q86X27 583 aaPredicted RBP9.76□□□□□ -0.85
COPS4-205ENST00000507376 SFTPA1Q8IWL2 248 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 ZBTB8OSQ8IWT0 167 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 ATAD1Q8NBU5 361 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 FAM200AQ8TCP9 573 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 LOXL4Q96JB6 756 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 PRIMPOLQ96LW4 560 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 ZNF512Q96ME7 567 aaPredicted RBP9.76□□□□□ -0.85
COPS4-205ENST00000507376 TBC1D32Q96NH3 1257 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 EBF3Q9H4W6 596 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 PRM3Q9NNZ6 103 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 ANKEF1Q9NU02 776 aa9.76□□□□□ -0.85
COPS4-205ENST00000507376 AFF4Q9UHB7 1163 aaKnown RBP9.76□□□□□ -0.85
COPS4-205ENST00000507376 HELZP42694 1942 aaKnown RBP9.76□□□□□ -0.85
COPS4-205ENST00000507376 ACKR2O00590 384 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 MARCH6O60337 910 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 DEXIO95424 95 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 CAVIN2O95810 425 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 CAPNS1P04632 268 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 ATF6P18850 670 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 ATP2B1P20020 1258 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 GABRR2P28476 465 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 GBP1P32455 592 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 TXKP42681 527 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 MAPK8P45983 427 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 IRX4P78413 519 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 DUSP4Q13115 394 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 PLD1Q13393 1074 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 KRT32Q14532 448 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 ECM1Q16610 540 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 MAPK6Q16659 721 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 COL28A1Q2UY09 1125 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 TMEM196Q5HYL7 178 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 IQCEQ6IPM2 695 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 EXOC8Q8IYI6 725 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 BEST2Q8NFU1 509 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 RPLP0P6Q8NHW5 317 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 ZBTB45Q96K62 511 aaPredicted RBP9.75□□□□□ -0.85
COPS4-205ENST00000507376 ZC3H10Q96K80 434 aaKnown RBP9.75□□□□□ -0.85
COPS4-205ENST00000507376 C22orf23Q9BZE7 217 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 C8orf33Q9H7E9 229 aaPredicted RBP9.75□□□□□ -0.85
COPS4-205ENST00000507376 TTC12Q9H892 705 aaPredicted RBP9.75□□□□□ -0.85
COPS4-205ENST00000507376 ZDHHC4Q9NPG8 344 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 PCDHGA5Q9Y5G8 931 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 SCN1AP35498 2009 aa9.75□□□□□ -0.85
COPS4-205ENST00000507376 ACACAQ13085 2346 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 MAST4O15021 2626 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 MTMR11A4FU01 709 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 LARGE1O95461 756 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 CTDNEP1O95476 244 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 PRB1P04280 392 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 GCFC2P16383 781 aaKnown RBP9.74□□□□□ -0.85
COPS4-205ENST00000507376 HSPA4P34932 840 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 EVCP57679 992 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 CCDC142Q17RM4 750 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 TSR1Q2NL82 804 aaKnown RBP9.74□□□□□ -0.85
COPS4-205ENST00000507376 DCAF4L1Q3SXM0 396 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 ZNF568Q3ZCX4 644 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 XKR4Q5GH76 650 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 PMS2CLQ68D20 193 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 PADI6Q6TGC4 694 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 ALKAL1Q6UXT8 129 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 MARCH9Q86YJ5 346 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 TRIM22Q8IYM9 498 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 ELMOD1Q8N336 334 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 TTC16Q8NEE8 873 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 OR10T2Q8NGX3 314 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 DEPTORQ8TB45 409 aa9.74□□□□□ -0.85
COPS4-205ENST00000507376 BPIFB1Q8TDL5 484 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms