RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ELMOD1Q8N336 334 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 TTC9BQ8N6N2 239 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 LRRC52Q8N7C0 313 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 ATAD1Q8NBU5 361 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 LEMD2Q8NC56 503 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 FLCNQ8NFG4 579 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 LEO1Q8WVC0 666 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 SCFD1Q8WVM8 642 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 MCRS1Q96EZ8 462 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 FAM84AQ96KN4 292 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 ZNF512Q96ME7 567 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 ZNF560Q96MR9 790 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 PGLYRP2Q96PD5 576 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 PYM1Q9BRP8 204 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 PDE11AQ9HCR9 933 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 ARHGEF3Q9NR81 526 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 FAM13BQ9NYF5 915 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 HSPBP1Q9NZL4 362 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 SIX4Q9UIU6 781 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 ITGA11Q9UKX5 1188 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 TCHHQ07283 1943 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 PTPRJQ12913 1337 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 FAM237AA0A1B0GTK4 181 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 ZNF233A6NK53 670 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 KLRC4O43908 158 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 ITGB3P05106 788 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 SLFN14P0C7P3 912 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 CMA1P23946 247 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 STARD6P59095 220 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 SNRPFP62306 86 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 PLD1Q13393 1074 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 CUL4BQ13620 913 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 FAM78AQ5JUQ0 283 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 CYP4A22Q5TCH4 519 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 SMYD5Q6GMV2 418 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 IQCEQ6IPM2 695 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 PDZD4Q76G19 769 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 LIMS2Q7Z4I7 341 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 LRRTM3Q86VH5 581 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 C12orf56Q8IXR9 622 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 SHKBP1Q8TBC3 707 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 CACTINQ8WUQ7 758 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 ELSPBP1Q96BH3 223 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 CHAMP1Q96JM3 812 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 ASB16Q96NS5 453 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 KXD1Q9BQD3 176 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 DDX23Q9BUQ8 820 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 PLA2G2FQ9BZM2 168 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 MTMR12Q9C0I1 747 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 IRF2BPLQ9H1B7 796 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 BLZF1Q9H2G9 400 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 TBC1D17Q9HA65 648 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 TRPV4Q9HBA0 871 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 KIAA1586Q9HCI6 787 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 ASAH2Q9NR71 780 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 AGPAT3Q9NRZ7 376 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 INTS13Q9NVM9 706 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 GDAP2Q9NXN4 497 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 SERTAD1Q9UHV2 236 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 CA14Q9ULX7 337 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 AGAP1Q9UPQ3 857 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 HPSEQ9Y251 543 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 ASB3Q9Y575 518 aa9.78□□□□□ -0.84
PDLIM5-209ENST00000506632 WDFY4Q6ZS81 3184 aa9.77□□□□□ -0.84
PDLIM5-209ENST00000506632 COL4A2P08572 1712 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 PFKFB1P16118 471 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 AFMP43652 599 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 MRE11P49959 708 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 EPHB3P54753 998 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 KRT85P78386 507 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 SMARCB1Q12824 385 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 SURF1Q15526 300 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 SLC39A12Q504Y0 691 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 LMBRD2Q68DH5 695 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 TANGO2Q6ICL3 276 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 GAREM2Q75VX8 874 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 ALYREFQ86V81 257 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 METTL23Q86XA0 190 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 CCDC105Q8IYK2 499 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 GRAMD1CQ8IYS0 662 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 THEM5Q8N1Q8 247 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 TMEM86AQ8N2M4 240 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 PDCL2Q8N4E4 241 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 OR5B17Q8NGF7 314 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 SPATA18Q8TC71 538 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 SPPL2BQ8TCT7 592 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 C2orf15Q8WU43 125 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 PSMG2Q969U7 264 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 PAGE5Q96GU1 130 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 ZSWIM3Q96MP5 696 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 PKMYT1Q99640 499 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 GZF1Q9H116 711 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 DLGAP2Q9P1A6 1054 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 CGNQ9P2M7 1197 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 USP25Q9UHP3 1055 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 L1RE1Q9UN81 338 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 NCANO14594 1321 aa9.77□□□□□ -0.85
PDLIM5-209ENST00000506632 COL4A3Q01955 1670 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms