RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 DUSP12Q9UNI6 340 aa16.77■□□□□ 0.28
CLDND1-211ENST00000506575 ZNF318Q5VUA4 2279 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 MTMR11A4FU01 709 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 ANHXE9PGG2 379 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 PRPF40AO75400 957 aaKnown RBP16.76■□□□□ 0.27
CLDND1-211ENST00000506575 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 EPHB3P54753 998 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 TSPY1Q01534 308 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 CYP24A1Q07973 514 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 HTR4Q13639 388 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 PSMD6Q15008 389 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 CENPPQ6IPU0 288 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 MTSS1LQ765P7 747 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 NPAS3Q8IXF0 933 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 DCP1BQ8IZD4 617 aaKnown RBP16.76■□□□□ 0.27
CLDND1-211ENST00000506575 SLC44A3Q8N4M1 653 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 OR5B17Q8NGF7 314 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 OR10T2Q8NGX3 314 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 CCDC127Q96BQ5 260 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 ZCWPW1Q9H0M4 648 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 ASAH2Q9NR71 780 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 CEP72Q9P209 647 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 SIX4Q9UIU6 781 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 SNX9Q9Y5X1 595 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 NUMBLQ9Y6R0 609 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 MUC6Q6W4X9 2439 aa16.76■□□□□ 0.27
CLDND1-211ENST00000506575 PTPRJQ12913 1337 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 VNN2O95498 520 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 MYL7Q01449 175 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 SMARCB1Q12824 385 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 DPYDQ12882 1025 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 SLC5A9Q2M3M2 681 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 TMEM86AQ8N2M4 240 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 PDCL2Q8N4E4 241 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 ATAD1Q8NBU5 361 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 LEMD2Q8NC56 503 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 ST13P5Q8NFI4 369 aaPredicted RBP16.75■□□□□ 0.27
CLDND1-211ENST00000506575 CXorf38Q8TB03 319 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 MCRS1Q96EZ8 462 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 HPDLQ96IR7 371 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 CGRRF1Q99675 332 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 GDAP2Q9NXN4 497 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 GDE1Q9NZC3 331 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 HSFX1Q9UBD0 423 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 L1RE1Q9UN81 338 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 SLC27A5Q9Y2P5 690 aa16.75■□□□□ 0.27
CLDND1-211ENST00000506575 ARIH1Q9Y4X5 557 aaPredicted RBP16.75■□□□□ 0.27
CLDND1-211ENST00000506575 PDXKO00764 312 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 NARSO43776 548 aaKnown RBP16.74■□□□□ 0.27
CLDND1-211ENST00000506575 RHOBTB3O94955 611 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 PDGFBP01127 241 aaPredicted RBP16.74■□□□□ 0.27
CLDND1-211ENST00000506575 SRFP11831 508 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 MYL4P12829 197 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 CEBPBP17676 345 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 TUFMP49411 452 aaKnown RBP16.74■□□□□ 0.27
CLDND1-211ENST00000506575 PARM1Q6UWI2 310 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 TRAPPC11Q7Z392 1133 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 TOP6BLQ8N6T0 577 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 C2orf15Q8WU43 125 aaKnown RBP16.74■□□□□ 0.27
CLDND1-211ENST00000506575 FGF14Q92915 247 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 SEPT5Q99719 369 aaPredicted RBP16.74■□□□□ 0.27
CLDND1-211ENST00000506575 RTP3Q9BQQ7 232 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 CRISPLD1Q9H336 500 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 ASB3Q9Y575 518 aa16.74■□□□□ 0.27
CLDND1-211ENST00000506575 CALUO43852 315 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-211ENST00000506575 MICAL2O94851 1124 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 CFHP08603 1231 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 LHX1P48742 406 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 TRPC3Q13507 836 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 VEPH1Q14D04 833 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 MGAT5BQ3V5L5 792 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 PRSS36Q5K4E3 855 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 ITIH5Q86UX2 942 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 ADGRF2Q8IZF7 708 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 HS6ST3Q8IZP7 471 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 SPATA18Q8TC71 538 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 SPPL2BQ8TCT7 592 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 TCEAL4Q96EI5 215 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 KCNH6Q9H252 994 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 KCTD10Q9H3F6 313 aa16.73■□□□□ 0.27
CLDND1-211ENST00000506575 DDX43Q9NXZ2 648 aaKnown RBP16.73■□□□□ 0.27
CLDND1-211ENST00000506575 PHACTR2O75167 634 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 SOAT2O75908 522 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 NR3C1P04150 777 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 RFX1P22670 979 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 PCSK1P29120 753 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 CDR1P51861 262 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 KCNB1Q14721 858 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 TAF12Q16514 161 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 NFE2Q16621 373 aaPredicted RBP16.72■□□□□ 0.27
CLDND1-211ENST00000506575 SCARA3Q6AZY7 606 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 DPH6Q7L8W6 267 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 SLC9A9Q8IVB4 645 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 SIX5Q8N196 739 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 TTC9BQ8N6N2 239 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 MMS19Q96T76 1030 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 KXD1Q9BQD3 176 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 ACBD6Q9BR61 282 aa16.72■□□□□ 0.27
CLDND1-211ENST00000506575 ABI2Q9NYB9 513 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms