RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 CDH8P55286 799 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 LILRA4P59901 499 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 FAM189BP81408 668 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 C1QBPQ07021 282 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 CNGA2Q16280 664 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 WHAMMP3Q1A5X7 153 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 PLEKHG4Q58EX7 1191 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 NAA35Q5VZE5 725 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 PAPD7Q5XG87 772 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 PHF13Q86YI8 300 aaPredicted RBP12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 ABI1Q8IZP0 508 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 TMEM86AQ8N2M4 240 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 MNS1Q8NEH6 495 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 OLIG1Q8TAK6 271 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 SLC35G2Q8TBE7 412 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 SPATA18Q8TC71 538 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 LPPQ93052 612 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 ZFP42Q96MM3 310 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 THAP2Q9H0W7 228 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 LHX5Q9H2C1 402 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 MRPL47Q9HD33 250 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 ACP6Q9NPH0 428 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 TMEM161AQ9NX61 479 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 TAS2R14Q9NYV8 317 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 CDC23Q9UJX2 597 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 LRFN2Q9ULH4 789 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 STRIP2Q9ULQ0 834 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 SAR1BQ9Y6B6 198 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 CAPN6Q9Y6Q1 641 aa12.79□□□□□ -0.36
POLR2J3-211ENST00000506060 TDRD15B5MCY1 1934 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 PODXLO00592 558 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 RIOK3O14730 519 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 PALMO75781 387 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 MTA2O94776 668 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 SLU7O95391 586 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 CYP1A2P05177 515 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 PRLRP16471 622 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 RFC2P35250 354 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 NOMO3P69849 1222 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 TLE2Q04725 743 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 CKAP4Q07065 602 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 TUSC3Q13454 348 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 MBTPS1Q14703 1052 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 DSTYKQ6XUX3 929 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 DAAM2Q86T65 1068 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 ZNF598Q86UK7 904 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 METTL23Q86XA0 190 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 PALB2Q86YC2 1186 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 MCOLN2Q8IZK6 566 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 CEP112Q8N8E3 955 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 SLC4A11Q8NBS3 891 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 MYRIPQ8NFW9 859 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 OR6B3Q8NGW1 331 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 TPCN2Q8NHX9 752 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 CYFIP2Q96F07 1278 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 FAM193BQ96PV7 902 aaPredicted RBP12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 C11orf49Q9H6J7 331 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 ADAM22Q9P0K1 906 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 HESX1Q9UBX0 185 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 CNOT8Q9UFF9 292 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 DSEQ9UL01 958 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 HYOU1Q9Y4L1 999 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 PCDHB7Q9Y5E2 793 aa12.78□□□□□ -0.36
POLR2J3-211ENST00000506060 A8MXQ7 604 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 CYB561D2O14569 222 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 SETSIPP0DME0 302 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 HSPA1AP0DMV8 641 aaKnown RBP12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 HSPA1BP0DMV9 641 aaKnown RBP12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 IBSPP21815 317 aaPredicted RBP12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 WARSP23381 471 aaKnown RBP12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 CDH5P33151 784 aaPredicted RBP12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 GNL1P36915 607 aaPredicted RBP12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 LHX1P48742 406 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 TAP1Q03518 808 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 SOX4Q06945 474 aaPredicted RBP12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 RPS6KA1Q15418 735 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 TRIM60Q495X7 471 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 NOMO2Q5JPE7 1267 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 SCARA3Q6AZY7 606 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 C11orf63Q6NUN7 778 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 PEX26Q7Z412 305 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 ERICH1Q86X53 443 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 ADGRF2Q8IZF7 708 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 ELOVL4Q9GZR5 314 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 CXCL16Q9H2A7 254 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 GOLGA2P5Q9HBQ8 144 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 TMEM39AQ9NV64 488 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 WDR35Q9P2L0 1181 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 RNF14Q9UBS8 474 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 SALL4Q9UJQ4 1053 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 AMFRQ9UKV5 643 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 ATP11BQ9Y2G3 1177 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 INPP5FQ9Y2H2 1132 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 MRFAP1Q9Y605 127 aa12.77□□□□□ -0.37
POLR2J3-211ENST00000506060 GRID2IPA4D2P6 1211 aa12.76□□□□□ -0.37
POLR2J3-211ENST00000506060 PPEF2O14830 753 aa12.76□□□□□ -0.37
POLR2J3-211ENST00000506060 NBNO60934 754 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms