RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 HMGCRP04035 888 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 WEE2P0C1S8 567 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 SMIM10L2AP0DMW4 78 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 SMIM10L2BP0DMW5 78 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 VDRP11473 427 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 EIF3BP55884 814 aaKnown RBP18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 INCA1Q0VD86 236 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 SGO2Q562F6 1265 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 ILDR2Q71H61 639 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 TLK2Q86UE8 772 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 CCDC105Q8IYK2 499 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 RCOR2Q8IZ40 523 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 CPB2Q96IY4 423 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZNF668Q96K58 619 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 APBA2Q99767 749 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 CELF4Q9BZC1 486 aaKnown RBP18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 DYNC1LI2O43237 492 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 KPNA6O60684 536 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 PPFIA2O75334 1257 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZNF865P0CJ78 1059 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 RARAP10276 462 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 GNAT1P11488 350 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 PTPN7P35236 360 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 YARSP54577 528 aaKnown RBP18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 CST9Q5W186 159 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 RUFY4Q6ZNE9 571 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 TMEM192Q8IY95 271 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 NME8Q8N427 588 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZBTB10Q96DT7 871 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 TMEM176AQ96HP8 235 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 HPDLQ96IR7 371 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 AP5M1Q9H0R1 490 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 DPP3Q9NY33 737 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 CPA4Q9UI42 421 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 TRPM7Q96QT4 1865 aa18.31■□□□□ 0.52
TRAPPC11-204ENST00000505676 HAS3O00219 553 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 GAS8O95995 478 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 CFHP08603 1231 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 RAD23BP54727 409 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 LMNB2Q03252 620 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 PTPN11Q06124 597 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 MFSD10Q14728 455 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 ACAP1Q15027 740 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 PPP1R15BQ5SWA1 713 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 DCUN1D2Q6PH85 259 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 SCARA5Q6ZMJ2 495 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 TMC3Q7Z5M5 1100 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 C18orf8Q96DM3 657 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 BARX2Q9UMQ3 279 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 RALGAPA2Q2PPJ7 1873 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 HMGB1P1B2RPK0 211 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 NDC80O14777 642 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 CD19P15391 556 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZNF157P51786 506 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 CAV1Q03135 178 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZNF268Q14587 947 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 CNGA2Q16280 664 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 C17orf99Q6UX52 265 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 CATSPER4Q7RTX7 472 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 POLNQ7Z5Q5 900 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 CDR2LQ86X02 465 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 LRRC52Q8N7C0 313 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 TRIM51Q9BSJ1 452 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 SETD4Q9NVD3 440 aa18.3■□□□□ 0.52
TRAPPC11-204ENST00000505676 XPOTO43592 962 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 GPR32O75388 356 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 DARSP14868 501 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 ATF7P17544 494 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 HSD17B3P37058 310 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 PSEN2P49810 448 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 CCNG2Q16589 344 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 ADAT2Q7Z6V5 191 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 BBOF1Q8ND07 529 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 CCHCR1Q8TD31 782 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 TFAP2BQ92481 460 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZFYVE28Q9HCC9 887 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 ZDHHC18Q9NUE0 388 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 WHRNQ9P202 907 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 POLIQ9UNA4 740 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 SIGLEC16A6NMB1 481 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 ITGBL1O95965 494 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 RPLP2P05387 115 aaKnown RBP18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 CYP2C9P11712 490 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 SNX16P57768 344 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 SLMAPQ14BN4 828 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 EMC10Q5UCC4 262 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 AADACL2Q6P093 401 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 CEP128Q6ZU80 1094 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 BEST2Q8NFU1 509 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 PIK3R5Q8WYR1 880 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 KIF12Q96FN5 646 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 DPH5Q9H2P9 285 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 AGAP1Q9UPQ3 857 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 EFR3BQ9Y2G0 817 aa18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC11-204ENST00000505676 KAT6AQ92794 2004 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 ADAM17P78536 824 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 SREBF2Q12772 1141 aa18.28■□□□□ 0.52
TRAPPC11-204ENST00000505676 KLF1Q13351 362 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms