RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 LDAHQ9H6V9 325 aa4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 TMEM8AQ9HCN3 771 aa4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 A1CFQ9NQ94 594 aaKnown RBP4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 NECTIN3Q9NQS3 549 aa4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 GJB4Q9NTQ9 266 aa4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 CFAP97Q9P2B7 532 aa4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 ING1Q9UK53 422 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 CRYL1Q9Y2S2 319 aa4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 TMEM98Q9Y2Y6 226 aa4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 RPS6KL1Q9Y6S9 549 aa4.54□□□□□ -1.68
TRAPPC13-208ENST00000505553 MBD3L4A6NDZ8 208 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 MBD3L3A6NE82 208 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 ARHGAP6O43182 974 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 TIMM44O43615 452 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 ITGA10O75578 1167 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 RNASEH2AO75792 299 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 MBD4O95243 580 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 ABHD16AO95870 558 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 CARSP49589 748 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 ITGA1P56199 1179 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 DUSP2Q05923 314 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 FHL2Q14192 279 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 TAF5Q15542 800 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 PABPC1LQ4VXU2 614 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 FBXO47Q5MNV8 452 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 FAM26FQ5R3K3 315 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 PHF19Q5T6S3 580 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 ARL6IP4Q66PJ3 421 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 TTLL5Q6EMB2 1281 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 MZT2BQ6NZ67 158 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 UNC13DQ70J99 1090 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 CLEC14AQ86T13 490 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 MICU3Q86XE3 530 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 TRMT2AQ8IZ69 625 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 SLC30A5Q8TAD4 765 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 FAM71BQ8TC56 605 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 SNRNP27Q8WVK2 155 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 LPPQ93052 612 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 C18orf8Q96DM3 657 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 NEUROD6Q96NK8 337 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 SLC26A6Q9BXS9 759 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 SMURF2Q9HAU4 748 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 RLIMQ9NVW2 624 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 ZNF212Q9UDV6 495 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 NRBP1Q9UHY1 535 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 SLC13A4Q9UKG4 626 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 CROTQ9UKG9 612 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 CDC42EP3Q9UKI2 254 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 ITGB1BP2Q9UKP3 347 aa4.53□□□□□ -1.68
TRAPPC13-208ENST00000505553 MROH6A6NGR9 719 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 PYCARD-AS1I3L0S3 204 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 MYO1CO00159 1063 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 NRP1O14786 923 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 SNX2O60749 519 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 MATN4O95460 622 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 KNG1P01042 644 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 HMGCRP04035 888 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 GNAI2P04899 355 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 XBP1P17861 261 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 KLRC1P26715 233 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 PCSK1P29120 753 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 ELF1P32519 619 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 KIR2DL3P43628 341 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 RXRGP48443 463 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 MEOX1P50221 254 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 STAT5BP51692 787 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 KCNQ1P51787 676 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 NOMO3P69849 1222 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 POU6F2P78424 691 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 PTH1RQ03431 593 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 ADAM9Q13443 819 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 KIF22Q14807 665 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 SURF1Q15526 300 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 RAB30Q15771 203 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 ADCK5Q3MIX3 580 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 CCDC93Q567U6 631 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 ANKRD45Q5TZF3 282 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 MCTP2Q6DN12 878 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 TANGO2Q6ICL3 276 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 JMJD6Q6NYC1 403 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZNF572Q7Z3I7 529 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 STK32CQ86UX6 486 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 PLXDC1Q8IUK5 500 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 YAF2Q8IY57 180 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 RTKN2Q8IZC4 609 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 AOPEPQ8N6M6 819 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 PLA2G15Q8NCC3 412 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 IL17RDQ8NFM7 739 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 MAML1Q92585 1016 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 RUBCNQ92622 972 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 DDX17Q92841 729 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 GCDHQ92947 438 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 EID2BQ96D98 161 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 CNPPD1Q9BV87 410 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 BRD9Q9H8M2 597 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 SLAMF7Q9NQ25 335 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 RABGAP1Q9Y3P9 1069 aa4.52□□□□□ -1.69
TRAPPC13-208ENST00000505553 ACTL7AQ9Y615 435 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms