RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 VSX1Q9NZR4 365 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 RNF181Q9P0P0 153 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 HSFX1Q9UBD0 423 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 PCDHGA2Q9Y5H1 932 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 NALCNQ8IZF0 1738 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 LRRC7Q96NW7 1537 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 FYB1O15117 783 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 GPR39O43194 453 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 C1QL1O75973 258 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 FOSP01100 380 aaPredicted RBP6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 POMCP01189 267 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 MTHFD2P13995 350 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 IL2RBP14784 551 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 ATP5JP18859 108 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 FDXRP22570 491 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 SOX5P35711 763 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 SIM1P81133 766 aaPredicted RBP6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 MPP3Q13368 585 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 MTM1Q13496 603 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 WDR43Q15061 677 aaKnown RBP eCLIP6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 CYP2A13Q16696 494 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 SEM1Q6ZVN7 128 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 RD3Q7Z3Z2 195 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 BOD1Q96IK1 185 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 UHRF1Q96T88 793 aaPredicted RBP6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 LRFN3Q9BTN0 628 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 LANCL2Q9NS86 450 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 DNAJC28Q9NX36 388 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 FOXJ2Q9P0K8 574 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 NRKQ7Z2Y5 1582 aa6.27□□□□□ -1.41
DEPDC1B-203ENST00000505017 TTC21AQ8NDW8 1320 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 USP6P35125 1406 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 DCCP43146 1447 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 VIL1P09327 827 aaKnown RBP6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 SLC6A4P31645 630 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 CXCR5P32302 372 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 PER3P56645 1201 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 BLOC1S1P78537 153 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 MRPS21P82921 87 aaKnown RBP6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 SLFN5Q08AF3 891 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 ZNF169Q14929 603 aaPredicted RBP6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 SDE2Q6IQ49 451 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 ARMC6Q6NXE6 501 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 DCBLD1Q8N8Z6 715 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 Q8NA96 180 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 CASKIN2Q8WXE0 1202 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 AHCYL2Q96HN2 611 aaKnown RBP6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 SENP6Q9GZR1 1112 aaPredicted RBP6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 LMTK3Q96Q04 1460 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 USP54Q70EL1 1684 aa6.26□□□□□ -1.41
DEPDC1B-203ENST00000505017 SSH2Q76I76 1423 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 SMG6Q86US8 1419 aaKnown RBP6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 NOMO3P69849 1222 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 NOMO2Q5JPE7 1267 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 Q6ZNX1 250 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 NPM2Q86SE8 214 aaKnown RBP6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 DPF2Q92785 391 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 RNF31Q96EP0 1072 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 MARS2Q96GW9 593 aaKnown RBP6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 RNPEPQ9H4A4 650 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 UNKLQ9H9P5 680 aaKnown RBP6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 ZNF277Q9NRM2 450 aaPredicted RBP6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 MOCS1Q9NZB8 636 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 RUVBL1Q9Y265 456 aaKnown RBP6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 INSL6Q9Y581 213 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 ACEP12821 1306 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 TTC21BQ7Z4L5 1316 aa6.25□□□□□ -1.41
DEPDC1B-203ENST00000505017 RGPD8O14715 1765 aaPredicted RBP6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 KIF1AQ12756 1690 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 SHPRHQ149N8 1683 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 CDK12Q9NYV4 1490 aaPredicted RBP6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 PNPLA6Q8IY17 1366 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 TCRBV7S2A1N4TA0A589 114 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 SYCE2Q6PIF2 218 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 COG3Q96JB2 828 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 ADI1Q9BV57 179 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 KCNE5Q9UJ90 142 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 NUDCQ9Y266 331 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 MAP2P11137 1827 aaKnown RBP6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 OVOS2A0A0J9YW53 1432 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 OVOS2Q6IE36 1432 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 SPATA31A6Q5VVP1 1343 aa6.24□□□□□ -1.41
DEPDC1B-203ENST00000505017 STRCQ7RTU9 1775 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 COL3A1P02461 1466 aaPredicted RBP6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 K7ESF4 209 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 GPR32O75388 356 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 ENDOD1O94919 500 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 MATN4O95460 622 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 GPANK1O95872 356 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 CKBP12277 381 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 AGXTP21549 392 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 MTHFSP49914 203 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 KRT26Q7Z3Y9 468 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 BOLLQ8N9W6 283 aaKnown RBP6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 NGDNQ8NEJ9 315 aaKnown RBP6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 CCHCR1Q8TD31 782 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 PNNQ9H307 717 aaKnown RBP6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 GSTO2Q9H4Y5 243 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 GALNT9Q9HCQ5 603 aa6.23□□□□□ -1.41
DEPDC1B-203ENST00000505017 NOX1Q9Y5S8 564 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms