RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TAS1R2Q8TE23 839 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 OXCT2Q9BYC2 517 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 FANCLQ9NW38 375 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 TIMM13Q9Y5L4 95 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 SNX9Q9Y5X1 595 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 EYSQ5T1H1 3165 aa12.77□□□□□ -0.36
PDLIM5-208ENST00000504489 SMTNL1A8MU46 457 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 TEX28O15482 410 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 CLASP2O75122 1294 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 AFPP02771 609 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 ADH1AP07327 375 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 MTIF2P46199 727 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 NRIP1P48552 1158 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 NDUFV1P49821 464 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 KCNJ12Q14500 433 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 COL19A1Q14993 1142 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 MAN2A1Q16706 1144 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 SOWAHAQ2M3V2 549 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 OVOS1Q6IE37 1185 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 ZNF280DQ6N043 979 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 RBM23Q86U06 439 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 PPFIBP1Q86W92 1011 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 METTL23Q86XA0 190 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 CREBRFQ8IUR6 639 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 PDCL2Q8N4E4 241 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 AOPEPQ8N6M6 819 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 CCDC150Q8NCX0 1101 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 SEMA4DQ92854 862 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 FAXDC2Q96IV6 333 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 IMPG2Q9BZV3 1241 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 RAB20Q9NX57 234 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 L1RE1Q9UN81 338 aa12.77□□□□□ -0.37
PDLIM5-208ENST00000504489 NOTCH4Q99466 2003 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 OR6C75A6NL08 312 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 GABRDO14764 452 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 PER2O15055 1255 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 TACC1O75410 805 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 P4HA1P13674 534 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 PRKCSHP14314 528 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 ZNF18P17022 549 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 KLRC2P26717 231 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 LHX1P48742 406 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 TNNC1P63316 161 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 MYL7Q01449 175 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 CETN1Q12798 172 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 KCNC3Q14003 757 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 RAB33AQ14088 237 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 IQCB1Q15051 598 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 CTC1Q2NKJ3 1217 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 CTXN3Q4LDR2 81 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 HSP90AA4PQ58FG1 418 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 SLC8B1Q6J4K2 584 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 RSPO2Q6UXX9 243 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 TMEM184AQ6ZMB5 413 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 DHX40Q8IX18 779 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 MICALL1Q8N3F8 863 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 EFHBQ8N7U6 833 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 SLC22A17Q8WUG5 538 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 TUBGCP2Q9BSJ2 902 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 PI4K2AQ9BTU6 479 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 HSD3B7Q9H2F3 369 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 IGFLR1Q9H665 355 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 NXF1Q9UBU9 619 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 FBXL5Q9UKA1 691 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 PRUNE2Q8WUY3 3088 aa12.76□□□□□ -0.37
PDLIM5-208ENST00000504489 COL6A3P12111 3177 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 ADAM12O43184 909 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 LRRN2O75325 713 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 RPL17P18621 184 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 OR1D2P34982 312 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 GTF2F1P35269 517 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 CLCN4P51793 760 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 ZNF445P59923 1031 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 NOP14P78316 857 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 ADAM15Q13444 863 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 CCDC85BQ15834 202 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 WDR44Q5JSH3 913 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 MIIPQ5JXC2 388 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 SPOPLQ6IQ16 392 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 LILRA6Q6PI73 481 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 LRSAM1Q6UWE0 723 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 DENND4AQ7Z401 1863 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 ADGRF2Q8IZF7 708 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 MAFAQ8NHW3 353 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 LMO3Q8TAP4 145 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 PABPC5Q96DU9 382 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 MMS19Q96T76 1030 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 RTP3Q9BQQ7 232 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 BCO2Q9BYV7 579 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 APOBEC3GQ9HC16 384 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 CBX8Q9HC52 389 aa12.75□□□□□ -0.37
PDLIM5-208ENST00000504489 POLIQ9UNA4 740 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms