RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 INPP5DQ92835 1189 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ITFG2Q969R8 447 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 PLVAPQ9BX97 442 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 OSBPL8Q9BZF1 889 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 LRRC19Q9H756 370 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SYNCQ9H7C4 482 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 DNAAF2Q9NVR5 837 aaKnown RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ARHGEF35A5YM69 484 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SIGLEC16A6NMB1 481 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 MEIS2O14770 477 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 DNAJC6O75061 913 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ATP6V1G1O75348 118 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 WFS1O76024 890 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SKIV2L2P42285 1042 aaKnown RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 PPP4CP60510 307 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 NCOA4Q13772 614 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 KIF22Q14807 665 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 KCNT1Q5JUK3 1230 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 TCHHL1Q5QJ38 904 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 IYDQ6PHW0 289 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 RSPH3Q86UC2 560 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SPATA24Q86W54 205 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 TREML1Q86YW5 311 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 PALM2Q8IXS6 379 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 RBM15BQ8NDT2 890 aaKnown RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 TAS1R2Q8TE23 839 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 PYROXD1Q8WU10 500 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 C7orf43Q8WVR3 580 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 CFAP57Q96MR6 1250 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 MMP19Q99542 508 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SYT11Q9BT88 431 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ACSS2Q9NR19 701 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 NDE1Q9NXR1 346 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 USP21Q9UK80 565 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 RPS6KL1Q9Y6S9 549 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ESYT2A0FGR8 921 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 DDTLA6NHG4 134 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 PIK3R2O00459 728 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 PPEF1O14829 653 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 SLITRK3O94933 977 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 FAM200BP0CF97 657 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 PEX3P56589 373 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 COG7P83436 770 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 SPIRE1Q08AE8 756 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 TXNRD3NBQ6F5E7 133 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 SLFN12Q8IYM2 578 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 ENDOVQ8N8Q3 282 aaKnown RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 PRPF31Q8WWY3 499 aaKnown RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 PSPC1Q8WXF1 523 aaKnown RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 GCNAQ96QF7 691 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 TRIM56Q9BRZ2 755 aaKnown RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 AMNQ9BXJ7 453 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 CHCHD3Q9NX63 227 aaKnown RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 APPL1Q9UKG1 709 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 CTDP1Q9Y5B0 961 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 ADGRA3Q8IWK6 1321 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 DCAF8L1A6NGE4 600 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 FSCN2O14926 492 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 LPXNO60711 386 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 AVILO75366 819 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 HNRNPCP07910 306 aaKnown RBP eCLIP8.02□□□□□ -1.131e-6■■■■□ 21.3
NEDD9-208ENST00000504387 ANPEPP15144 967 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 GALK1P51570 392 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 BPIFB4P59827 614 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 BASP1P80723 227 aaKnown RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 ACVR2BQ13705 512 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 BMPR2Q13873 1038 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 MSS51Q4VC12 460 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 RALGPS1Q5JS13 557 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 GPATCH4Q5T3I0 446 aaKnown RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 FAXCQ5TGI0 409 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 ANKRD22Q5VYY1 191 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 PRPF39Q86UA1 669 aaKnown RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 CERS5Q8N5B7 392 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 CCDC89Q8N998 374 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 ETNPPLQ8TBG4 499 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 CERKQ8TCT0 537 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 GATA6Q92908 595 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 CD101Q93033 1021 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 SPATA16Q9BXB7 569 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 ASCC2Q9H1I8 757 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-208ENST00000504387 GTF3C4Q9UKN8 822 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 PCDHGB4Q9UN71 923 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 PCDHGB5Q9Y5G0 923 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 SNED1Q8TER0 1413 aa8.02□□□□□ -1.13
NEDD9-208ENST00000504387 SLC16A3O15427 465 aaKnown RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 PEX1O43933 1283 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 SUPT3HO75486 399 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 CIB2O75838 187 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 EYA4O95677 639 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 MT-ND3P03897 115 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 FDX1P10109 184 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 MYCLP12524 364 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 ECE1P42892 770 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 YWHAGP61981 247 aaKnown RBP eCLIP8.01□□□□□ -1.13
NEDD9-208ENST00000504387 TMPRSS15P98073 1019 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 DSG1Q02413 1049 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 ASPHQ12797 758 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 DLG1Q12959 904 aa8.01□□□□□ -1.13
NEDD9-208ENST00000504387 TMEM132AQ24JP5 1023 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms