RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 DAPK3O43293 454 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 RPS6KA5O75582 802 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 ITGBL1O95965 494 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 GAS8O95995 478 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 VTNP04004 478 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 GJB1P08034 283 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 GOLGA6DP0CG33 693 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 ZNF865P0CJ78 1059 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 SETSIPP0DME0 302 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 GABRB2P47870 512 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 MARCKSL1P49006 195 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 YARSP54577 528 aaKnown RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 ADAM17P78536 824 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 ZNF211Q13398 564 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 SLMAPQ14BN4 828 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 SIX1Q15475 284 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 TAF1CQ15572 869 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 CCNG2Q16589 344 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 WDR72Q3MJ13 1102 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 GJC2Q5T442 439 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 CST9Q5W186 159 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 CHADLQ6NUI6 762 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 DNAJC24Q6P3W2 148 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 GSPT2Q8IYD1 628 aaKnown RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 TSEN2Q8NCE0 465 aaKnown RBP10.39□□□□□ -0.75
COL1A1-210ENST00000504289 BBOF1Q8ND07 529 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 ATL2Q8NHH9 583 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 TMEM176AQ96HP8 235 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 HPDLQ96IR7 371 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 SCLT1Q96NL6 688 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 FMO2Q99518 471 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 APBA2Q99767 749 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 FOXP3Q9BZS1 431 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 AP5M1Q9H0R1 490 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 RRAGCQ9HB90 399 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 ST7Q9NRC1 585 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 ZDHHC18Q9NUE0 388 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 DPP3Q9NY33 737 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 GOLGA6AQ9NYA3 693 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 WHRNQ9P202 907 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 NR2E1Q9Y466 385 aa10.39□□□□□ -0.75
COL1A1-210ENST00000504289 ZSCAN5CA6NGD5 496 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-210ENST00000504289 SRRM3A6NNA2 597 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-210ENST00000504289 DYNC1LI2O43237 492 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-210ENST00000504289 GPR32O75388 356 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 ECEL1O95672 775 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 CD4P01730 458 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 ITGB3P05106 788 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 NFICP08651 508 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 FAM153BP0C7A2 387 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 SMIM10L2AP0DMW4 78 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 SMIM10L2BP0DMW5 78 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 RARAP10276 462 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 DARSP14868 501 aaKnown RBP10.38□□□□□ -0.75
COL1A1-210ENST00000504289 ATF7P17544 494 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-210ENST00000504289 CD58P19256 250 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 ITIH2P19823 946 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 HOXC8P31273 242 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 PNPLA4P41247 253 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 PSEN2P49810 448 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 RAD23BP54727 409 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 NKX3-2P78367 333 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 PTPN11Q06124 597 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-210ENST00000504289 SREBF2Q12772 1141 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 KLF1Q13351 362 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-210ENST00000504289 MFSD10Q14728 455 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 ZBTB6Q15916 424 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 PTPROQ16827 1216 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 FAM153CQ494X1 144 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 SGO2Q562F6 1265 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 DCUN1D2Q6PH85 259 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 TMC3Q7Z5M5 1100 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 UNC93AQ86WB7 457 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 RASAL3Q86YV0 1011 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 CCDC105Q8IYK2 499 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 ARFGAP2Q8N6H7 521 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 CEP120Q8N960 986 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 BEST2Q8NFU1 509 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 KAT2BQ92831 832 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 ZIM3Q96PE6 472 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 TXLNGYQ9BZA5 131 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 FAM204AQ9H8W3 233 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 ZFYVE28Q9HCC9 887 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 ERVK-5Q9HDB9 667 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 FAM153AQ9UHL3 310 aa10.38□□□□□ -0.75
COL1A1-210ENST00000504289 CITO14578 2027 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 SHOX2O60902 331 aaPredicted RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 TJP3O95049 919 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 KRT19P08727 400 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 KRT7P08729 469 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 NUDT17P0C025 328 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 CYP2C9P11712 490 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 CYP3A5P20815 502 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 BRD2P25440 801 aaKnown RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 HOXA11P31270 313 aaPredicted RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 HSD17B3P37058 310 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 ZNF157P51786 506 aaPredicted RBP10.37□□□□□ -0.75
COL1A1-210ENST00000504289 GUCY2FP51841 1108 aa10.37□□□□□ -0.75
COL1A1-210ENST00000504289 CRYBB1P53674 252 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms