RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 GRIN2DO15399 1336 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 ITGB3P05106 788 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 NR1D1P20393 614 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 GJC1P36383 396 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 SSR1P43307 286 aaKnown RBP23.85■■□□□ 1.41
PCDH1-204ENST00000503492 PMS2P54278 862 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 GNGT1P63211 74 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 LACTBP83111 547 aaPredicted RBP23.85■■□□□ 1.41
PCDH1-204ENST00000503492 SLC10A6Q3KNW5 377 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 MARCH8Q5T0T0 291 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 DENND1BQ6P3S1 775 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 ANKS1BQ7Z6G8 1248 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 ART4Q93070 314 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 MCEEQ96PE7 176 aa23.85■■□□□ 1.41
PCDH1-204ENST00000503492 ZEB2O60315 1214 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 TCF4P15884 667 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 KRT17Q04695 432 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 PPP1R7Q15435 360 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 DUSP28Q4G0W2 176 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 DNAJC24Q6P3W2 148 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 FOXR1Q6PIV2 292 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 NLRP7Q8WX94 980 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 MMP3P08254 477 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 OGDHQ02218 1023 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 GRIK4Q16099 956 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 PPP1R15BQ5SWA1 713 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 SMYD5Q6GMV2 418 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 RUFY4Q6ZNE9 571 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 ERICH1Q86X53 443 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 EXD1Q8NHP7 514 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 PTPN18Q99952 460 aa23.84■■□□□ 1.41
PCDH1-204ENST00000503492 GBA2Q9HCG7 927 aaPredicted RBP23.84■■□□□ 1.41
PCDH1-204ENST00000503492 CD19P15391 556 aa23.83■■□□□ 1.41
PCDH1-204ENST00000503492 RAD23BP54727 409 aa23.83■■□□□ 1.41
PCDH1-204ENST00000503492 ATP13A4Q4VNC1 1196 aa23.83■■□□□ 1.41
PCDH1-204ENST00000503492 OSBPL8Q9BZF1 889 aa23.83■■□□□ 1.41
PCDH1-204ENST00000503492 PABPC3Q9H361 631 aaKnown RBP23.83■■□□□ 1.41
PCDH1-204ENST00000503492 ASB7Q9H672 318 aa23.83■■□□□ 1.41
PCDH1-204ENST00000503492 MTRF1LQ9UGC7 380 aaKnown RBP23.83■■□□□ 1.41
PCDH1-204ENST00000503492 TSPAN1O60635 241 aa23.83■■□□□ 1.4
PCDH1-204ENST00000503492 HOXD8P13378 290 aaPredicted RBP23.83■■□□□ 1.4
PCDH1-204ENST00000503492 PDCLQ13371 301 aa23.83■■□□□ 1.4
PCDH1-204ENST00000503492 ACVR2BQ13705 512 aa23.83■■□□□ 1.4
PCDH1-204ENST00000503492 CYP4A22Q5TCH4 519 aa23.83■■□□□ 1.4
PCDH1-204ENST00000503492 NPLOC4Q8TAT6 608 aa23.83■■□□□ 1.4
PCDH1-204ENST00000503492 RNF25Q96BH1 459 aaPredicted RBP23.83■■□□□ 1.4
PCDH1-204ENST00000503492 TINF2Q9BSI4 451 aa23.83■■□□□ 1.4
PCDH1-204ENST00000503492 SMYD3Q9H7B4 428 aa23.83■■□□□ 1.4
PCDH1-204ENST00000503492 CEP83Q9Y592 693 aa23.83■■□□□ 1.4
PCDH1-204ENST00000503492 ADCY6O43306 1168 aa23.82■■□□□ 1.4
PCDH1-204ENST00000503492 IVLP07476 585 aa23.82■■□□□ 1.4
PCDH1-204ENST00000503492 ORC1Q13415 861 aa23.82■■□□□ 1.4
PCDH1-204ENST00000503492 ILDR2Q71H61 639 aa23.82■■□□□ 1.4
PCDH1-204ENST00000503492 PLEKHH3Q7Z736 793 aa23.82■■□□□ 1.4
PCDH1-204ENST00000503492 KIAA0319LQ8IZA0 1049 aa23.82■■□□□ 1.4
PCDH1-204ENST00000503492 OR6J1Q8NGC5 347 aa23.82■■□□□ 1.4
PCDH1-204ENST00000503492 F8VP50 259 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 EIF3HO15372 352 aaKnown RBP eCLIP23.81■■□□□ 1.4
PCDH1-204ENST00000503492 SPRYD7Q5W111 196 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 DCUN1D2Q6PH85 259 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 SCLT1Q96NL6 688 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 TWNKQ96RR1 684 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 ABHD16BQ9H3Z7 469 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 KLHL11Q9NVR0 708 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 HMGXB4Q9UGU5 601 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 CYTH4Q9UIA0 394 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 TP73O15350 636 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 SHBGP04278 402 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 FKBP1BP68106 108 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 PTPN20Q4JDL3 420 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 C3orf20Q8ND61 904 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 FAXDC2Q96IV6 333 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 LHX5Q9H2C1 402 aa23.81■■□□□ 1.4
PCDH1-204ENST00000503492 PAEPP09466 180 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 NUDT17P0C025 328 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 EIF3BP55884 814 aaKnown RBP23.8■■□□□ 1.4
PCDH1-204ENST00000503492 FAM110CQ1W6H9 321 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 KRT71Q3SY84 523 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 UBAP2Q5T6F2 1119 aaKnown RBP23.8■■□□□ 1.4
PCDH1-204ENST00000503492 AGBL2Q5U5Z8 902 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 SLC4A11Q8NBS3 891 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 PARK7Q99497 189 aaKnown RBP23.8■■□□□ 1.4
PCDH1-204ENST00000503492 SEMA4AQ9H3S1 761 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 BCCIPQ9P287 314 aaKnown RBP eCLIP23.8■■□□□ 1.4
PCDH1-204ENST00000503492 TJP2Q9UDY2 1190 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 PI4K2BG5E9Z4 385 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 FGFR4P22455 802 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 POLR2BP30876 1174 aaKnown RBP23.8■■□□□ 1.4
PCDH1-204ENST00000503492 ATICP31939 592 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 IFFO1Q0D2I5 559 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 PTK6Q13882 451 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 FAM118BQ9BPY3 351 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 ELOVL4Q9GZR5 314 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 VRTNQ9H8Y1 702 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 WHRNQ9P202 907 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 ASIC3Q9UHC3 531 aa23.8■■□□□ 1.4
PCDH1-204ENST00000503492 A0A1B0GUA9 196 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 MED7O43513 233 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 IVDP26440 423 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 HPDP32754 393 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms