RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ARMCX5Q6P1M9 558 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 VITQ6UXI7 678 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 DNAJB7Q7Z6W7 309 aaPredicted RBP17.55■□□□□ 0.4
SCLT1-204ENST00000503215 C1orf127Q8N9H9 656 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 CXorf38Q8TB03 319 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 ZSCAN18Q8TBC5 510 aaPredicted RBP17.55■□□□□ 0.4
SCLT1-204ENST00000503215 SMARCD2Q92925 531 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 LPIN3Q9BQK8 851 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 TRIM9Q9C026 710 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 PDE11AQ9HCR9 933 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 HEBP1Q9NRV9 189 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 DMDP11532 3685 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 F5P12259 2224 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 CFAP54Q96N23 3096 aa17.55■□□□□ 0.4
SCLT1-204ENST00000503215 PRR23AA6NEV1 266 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 FAM170BA6NMN3 283 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 KPNA7A9QM74 516 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 CUTAO60888 179 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 YEATS4O95619 227 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 GARTP22102 1010 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 ALDH1A3P47895 512 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 EPHB3P54753 998 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 UBXN2BQ14CS0 331 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 LMBRD2Q68DH5 695 aaPredicted RBP17.54■□□□□ 0.4
SCLT1-204ENST00000503215 TPRG1Q6ZUI0 275 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 GAREM2Q75VX8 874 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 HSCBQ8IWL3 235 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 CCDC65Q8IXS2 484 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 SHDQ96IW2 340 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 CHAMP1Q96JM3 812 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 TNMDQ9H2S6 317 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 TMLHEQ9NVH6 421 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 RBAKQ9NYW8 714 aaPredicted RBP17.54■□□□□ 0.4
SCLT1-204ENST00000503215 SIX4Q9UIU6 781 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 AGAP1Q9UPQ3 857 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 TSC2P49815 1807 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 FAM186AA6NE01 2351 aa17.54■□□□□ 0.4
SCLT1-204ENST00000503215 EXTL3O43909 919 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 F13A1P00488 732 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 ITGB3P05106 788 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 ATF6P18850 670 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 PAX3P23760 479 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 TARSP26639 723 aaKnown RBP17.53■□□□□ 0.4
SCLT1-204ENST00000503215 PFKPQ01813 784 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 PRKCQQ04759 706 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 MAML2Q8IZL2 1156 aaPredicted RBP17.53■□□□□ 0.4
SCLT1-204ENST00000503215 LRRC3BQ96PB8 259 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 SEPT5Q99719 369 aaPredicted RBP17.53■□□□□ 0.4
SCLT1-204ENST00000503215 MKNK1Q9BUB5 465 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 LTB4R2Q9NPC1 389 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 PCDHA7Q9UN72 937 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 R4GN57 208 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 PTPRJQ12913 1337 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.53■□□□□ 0.4
SCLT1-204ENST00000503215 HCRTO43612 131 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 GDI1P31150 447 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 ASIC1P78348 528 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 PLD1Q13393 1074 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 FZD5Q13467 585 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 ALCAMQ13740 583 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 CCDC142Q17RM4 750 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 METTL23Q86XA0 190 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 CBWD2Q8IUF1 395 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 C1orf210Q8IVY1 113 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 PDCL2Q8N4E4 241 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 CSGALNACT2Q8N6G5 542 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 LEMD2Q8NC56 503 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 STKLD1Q8NE28 680 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 OR5B17Q8NGF7 314 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 GIPC2Q8TF65 315 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 TRMT61BQ9BVS5 477 aaKnown RBP17.53■□□□□ 0.4
SCLT1-204ENST00000503215 MTMR12Q9C0I1 747 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 BLZF1Q9H2G9 400 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 SLITRK6Q9H5Y7 841 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 BRD9Q9H8M2 597 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 DSEQ9UL01 958 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 L1RE1Q9UN81 338 aa17.53■□□□□ 0.4
SCLT1-204ENST00000503215 HEPACAM2A8MVW5 462 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 POLR2DO15514 142 aaKnown RBP17.52■□□□□ 0.39
SCLT1-204ENST00000503215 GPR15P49685 360 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 DNM1Q05193 864 aaKnown RBP17.52■□□□□ 0.39
SCLT1-204ENST00000503215 BFSP1Q12934 665 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 MGAT5BQ3V5L5 792 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 SV2CQ496J9 727 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 EPM2AIP1Q7L775 607 aaPredicted RBP17.52■□□□□ 0.39
SCLT1-204ENST00000503215 OSTM1Q86WC4 334 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 NT5DC4Q86YG4 428 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 THEM5Q8N1Q8 247 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 GPD1LQ8N335 351 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 IQUBQ8NA54 791 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 NKD2Q969F2 451 aaPredicted RBP17.52■□□□□ 0.39
SCLT1-204ENST00000503215 PSMG2Q969U7 264 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 C7orf25Q9BPX7 421 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 TMEM206Q9H813 350 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 TRPV4Q9HBA0 871 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 IL21Q9HBE4 155 aa17.52■□□□□ 0.39
SCLT1-204ENST00000503215 ABI2Q9NYB9 513 aaPredicted RBP17.52■□□□□ 0.39
SCLT1-204ENST00000503215 TGFB1I1O43294 461 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 LDHAP00338 332 aaKnown RBP17.51■□□□□ 0.39
SCLT1-204ENST00000503215 HSP90AA1P07900 732 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms