RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 PSMC3IPQ9P2W1 217 aaPredicted RBP25.86■■□□□ 1.73
DDX41-202ENST00000503078 A0A1W2PPM1 405 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 KRT1P04264 644 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 RNASEH2BQ5TBB1 312 aaKnown RBP25.85■■□□□ 1.73
DDX41-202ENST00000503078 PPP1R2P3Q6NXS1 205 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 AEBP2Q6ZN18 517 aaPredicted RBP25.85■■□□□ 1.73
DDX41-202ENST00000503078 CENPUQ71F23 418 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 MICAL1Q8TDZ2 1067 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 CYLDQ9NQC7 956 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 MAP3K20Q9NYL2 800 aaKnown RBP25.85■■□□□ 1.73
DDX41-202ENST00000503078 CORO1CQ9ULV4 474 aaPredicted RBP25.85■■□□□ 1.73
DDX41-202ENST00000503078 LRRC42Q9Y546 428 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 TRAFD1O14545 582 aaPredicted RBP25.85■■□□□ 1.73
DDX41-202ENST00000503078 ATP2A1O14983 1001 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 MCL1Q07820 350 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 CAPRIN2Q6IMN6 1127 aaKnown RBP25.85■■□□□ 1.73
DDX41-202ENST00000503078 OTOAQ7RTW8 1153 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 TAS1R3Q7RTX0 852 aa25.85■■□□□ 1.73
DDX41-202ENST00000503078 TPBGLP0DKB5 382 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 TCF4P15884 667 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 GM2AP17900 193 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 ABL2P42684 1182 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 RPS6P62753 249 aaKnown RBP25.84■■□□□ 1.73
DDX41-202ENST00000503078 SLC45A4Q5BKX6 768 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 WASHC2DQ5SRD0 308 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 LVRNQ6Q4G3 990 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 RDM1Q8NG50 284 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 ZNF75CPQ92670 426 aaPredicted RBP25.84■■□□□ 1.73
DDX41-202ENST00000503078 MRRFQ96E11 262 aaKnown RBP25.84■■□□□ 1.73
DDX41-202ENST00000503078 MAK16Q9BXY0 300 aaKnown RBP25.84■■□□□ 1.73
DDX41-202ENST00000503078 SHOC2Q9UQ13 582 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 PCDHA10Q9Y5I2 948 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 YDJCA8MPS7 323 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 NDC80O14777 642 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 TBC1D12O60347 775 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 VNN1O95497 513 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 CBX6O95503 412 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 CHRNA5P30532 468 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 RNASELQ05823 741 aaKnown RBP25.84■■□□□ 1.73
DDX41-202ENST00000503078 PDIA2Q13087 525 aaKnown RBP25.84■■□□□ 1.73
DDX41-202ENST00000503078 CCDC125Q86Z20 511 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 CDAN1Q8IWY9 1227 aa25.84■■□□□ 1.73
DDX41-202ENST00000503078 APOBEC3GQ9HC16 384 aaKnown RBP25.84■■□□□ 1.73
DDX41-202ENST00000503078 RAVER2Q9HCJ3 691 aaKnown RBP25.84■■□□□ 1.73
DDX41-202ENST00000503078 SSU72Q9NP77 194 aaKnown RBP25.84■■□□□ 1.73
DDX41-202ENST00000503078 TESPA1A2RU30 521 aaPredicted RBP25.83■■□□□ 1.73
DDX41-202ENST00000503078 RXRBP28702 533 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 EPHB2P29323 1055 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 RAD23BP54727 409 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 WNT7BP56706 349 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 RPL7AP62424 266 aaKnown RBP25.83■■□□□ 1.73
DDX41-202ENST00000503078 TAF1BQ53T94 588 aaPredicted RBP25.83■■□□□ 1.73
DDX41-202ENST00000503078 SPOCD1Q6ZMY3 1216 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 NLRX1Q86UT6 975 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 ENDOVQ8N8Q3 282 aaKnown RBP25.83■■□□□ 1.73
DDX41-202ENST00000503078 NUDCD1Q96RS6 583 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 PDCD2LQ9BRP1 358 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 GABBR1Q9UBS5 961 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 C2CD2LO14523 706 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 ZWINTO95229 277 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 FGFR1P11362 822 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 LIG4P49917 911 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 VCPP55072 806 aaKnown RBP25.83■■□□□ 1.73
DDX41-202ENST00000503078 RTP1P59025 263 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 OASLQ15646 514 aaKnown RBP25.83■■□□□ 1.73
DDX41-202ENST00000503078 EFHC2Q5JST6 749 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 NLRP9Q7RTR0 991 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 TEX9Q8N6V9 391 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 RBBP8NLQ8NC74 664 aaPredicted RBP25.83■■□□□ 1.73
DDX41-202ENST00000503078 MCPH1Q8NEM0 835 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 ZFP69BQ9UJL9 534 aa25.83■■□□□ 1.73
DDX41-202ENST00000503078 ZNF862O60290 1169 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 LRRC38Q5VT99 294 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 FYB2Q5VWT5 728 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 RMDN3Q96TC7 470 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 FAM167BQ9BTA0 163 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 SLC24A3Q9HC58 644 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 ARHGAP28Q9P2N2 729 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 RPL26L1Q9UNX3 145 aaKnown RBP25.82■■□□□ 1.72
DDX41-202ENST00000503078 IVNS1ABPQ9Y6Y0 642 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 PTPRJQ12913 1337 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 TMEM191CA6NGB0 347 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 TMEM191BP0C7N4 346 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 KRT4P19013 534 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 GEMIN4P57678 1058 aaKnown RBP25.82■■□□□ 1.72
DDX41-202ENST00000503078 WDR72Q3MJ13 1102 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 ZNF398Q8TD17 642 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 SH3TC2Q8TF17 1288 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 PCDH9Q9HC56 1237 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 PDLIM7Q9NR12 457 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 ZMYND8Q9ULU4 1186 aaPredicted RBP25.82■■□□□ 1.72
DDX41-202ENST00000503078 CNTN6Q9UQ52 1028 aa25.82■■□□□ 1.72
DDX41-202ENST00000503078 DGAT1O75907 488 aa25.81■■□□□ 1.72
DDX41-202ENST00000503078 ITGAVP06756 1048 aa25.81■■□□□ 1.72
DDX41-202ENST00000503078 PTPN4P29074 926 aa25.81■■□□□ 1.72
DDX41-202ENST00000503078 NLRP11P59045 1033 aaKnown RBP25.81■■□□□ 1.72
DDX41-202ENST00000503078 NOP14P78316 857 aaKnown RBP25.81■■□□□ 1.72
DDX41-202ENST00000503078 DLGAP5Q15398 846 aa25.81■■□□□ 1.72
DDX41-202ENST00000503078 NKD2Q969F2 451 aaPredicted RBP25.81■■□□□ 1.72
DDX41-202ENST00000503078 ZNF341Q9BYN7 854 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms