RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CTNNA2P26232 953 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 RNASE9P60153 205 aaKnown RBP23.39■■□□□ 1.33
PTPN13-205ENST00000502971 PLEKHA7Q6IQ23 1121 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 MMS22LQ6ZRQ5 1243 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 RNF180Q86T96 592 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 SLC4A11Q8NBS3 891 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 BTBD6Q96KE9 485 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 LRRC1Q9BTT6 524 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 APOL6Q9BWW8 343 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 SENP6Q9GZR1 1112 aaPredicted RBP23.39■■□□□ 1.33
PTPN13-205ENST00000502971 CXCL16Q9H2A7 254 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 RNF216Q9NWF9 866 aaPredicted RBP23.39■■□□□ 1.33
PTPN13-205ENST00000502971 PARP2Q9UGN5 583 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 BARX2Q9UMQ3 279 aaPredicted RBP23.39■■□□□ 1.33
PTPN13-205ENST00000502971 PTPN22Q9Y2R2 807 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 PTCH2Q9Y6C5 1203 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 CCDC66A2RUB6 948 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 ATP8B1O43520 1251 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 SPOPO43791 374 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 RPS6KA5O75582 802 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 ZRANB2O95218 330 aaKnown RBP eCLIP23.38■■□□□ 1.33
PTPN13-205ENST00000502971 CD19P15391 556 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 ATF7P17544 494 aaPredicted RBP23.38■■□□□ 1.33
PTPN13-205ENST00000502971 SLC1A1P43005 524 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 TWF2Q6IBS0 349 aaKnown RBP23.38■■□□□ 1.33
PTPN13-205ENST00000502971 NAP1L3Q99457 506 aaPredicted RBP23.38■■□□□ 1.33
PTPN13-205ENST00000502971 ELOVL4Q9GZR5 314 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 CHST12Q9NRB3 414 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 PARVAQ9NVD7 372 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 TUBGCP4Q9UGJ1 667 aa23.38■■□□□ 1.33
PTPN13-205ENST00000502971 SMIM28A0A1B0GU29 152 aa23.37■■□□□ 1.33
PTPN13-205ENST00000502971 CCDC188H7C350 402 aa23.37■■□□□ 1.33
PTPN13-205ENST00000502971 MYO1FO00160 1098 aa23.37■■□□□ 1.33
PTPN13-205ENST00000502971 CTNNA1P35221 906 aaKnown RBP23.37■■□□□ 1.33
PTPN13-205ENST00000502971 PTPN11Q06124 597 aaPredicted RBP23.37■■□□□ 1.33
PTPN13-205ENST00000502971 MGAT3Q09327 533 aa23.37■■□□□ 1.33
PTPN13-205ENST00000502971 MAMLD1Q13495 774 aa23.37■■□□□ 1.33
PTPN13-205ENST00000502971 DCAF12L1Q5VU92 463 aa23.37■■□□□ 1.33
PTPN13-205ENST00000502971 C8orf74Q6P047 294 aa23.37■■□□□ 1.33
PTPN13-205ENST00000502971 SMG8Q8ND04 991 aaKnown RBP23.37■■□□□ 1.33
PTPN13-205ENST00000502971 C1orf131Q8NDD1 294 aaKnown RBP23.37■■□□□ 1.33
PTPN13-205ENST00000502971 KIAA1257Q9ULG3 409 aa23.37■■□□□ 1.33
PTPN13-205ENST00000502971 PCDHA3Q9Y5H8 950 aa23.37■■□□□ 1.33
PTPN13-205ENST00000502971 CHRNA1P02708 482 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 MYCNP04198 464 aaPredicted RBP23.36■■□□□ 1.33
PTPN13-205ENST00000502971 INHAP05111 366 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 VDRP11473 427 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 CYP3A5P20815 502 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 PEX5P50542 639 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 C9orf57Q5W0N0 161 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 ALG3Q92685 438 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 WNT8BQ93098 351 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 TWNKQ96RR1 684 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 LCMT1Q9UIC8 334 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 ST3GAL5Q9UNP4 418 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 GRIN2DO15399 1336 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 PTGISQ16647 500 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 GLRA4Q5JXX5 417 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 WDTC1Q8N5D0 677 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 C18orf25Q96B23 403 aaPredicted RBP23.36■■□□□ 1.33
PTPN13-205ENST00000502971 RNPC3Q96LT9 517 aaKnown RBP23.36■■□□□ 1.33
PTPN13-205ENST00000502971 RNF39Q9H2S5 420 aa23.36■■□□□ 1.33
PTPN13-205ENST00000502971 HMX1Q9NP08 348 aaPredicted RBP23.36■■□□□ 1.33
PTPN13-205ENST00000502971 GPR182O15218 404 aa23.35■■□□□ 1.33
PTPN13-205ENST00000502971 RRP9O43818 475 aaKnown RBP23.35■■□□□ 1.33
PTPN13-205ENST00000502971 C2CD6Q53TS8 623 aa23.35■■□□□ 1.33
PTPN13-205ENST00000502971 ERICH1Q86X53 443 aa23.35■■□□□ 1.33
PTPN13-205ENST00000502971 FEZF2Q8TBJ5 459 aa23.35■■□□□ 1.33
PTPN13-205ENST00000502971 KRT35Q92764 455 aa23.35■■□□□ 1.33
PTPN13-205ENST00000502971 KLK14Q9P0G3 267 aa23.35■■□□□ 1.33
PTPN13-205ENST00000502971 HMGXB4Q9UGU5 601 aa23.35■■□□□ 1.33
PTPN13-205ENST00000502971 STRIP2Q9ULQ0 834 aa23.35■■□□□ 1.33
PTPN13-205ENST00000502971 PDCD11Q14690 1871 aaKnown RBP23.35■■□□□ 1.33
PTPN13-205ENST00000502971 TRIP11Q15643 1979 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 KRIT1O00522 736 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 PIRO00625 290 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 PROSCO94903 275 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 FGGP02679 453 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 HSPA8P11142 646 aaKnown RBP23.34■■□□□ 1.33
PTPN13-205ENST00000502971 PNPLA4P41247 253 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 NDST1P52848 882 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 TAP1Q03518 808 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 CNGA2Q16280 664 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 LONRF2Q1L5Z9 754 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 DENND1BQ6P3S1 775 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 PHLDB2Q86SQ0 1253 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 HACE1Q8IYU2 909 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 HEXIM2Q96MH2 286 aaKnown RBP23.34■■□□□ 1.33
PTPN13-205ENST00000502971 ZNF560Q96MR9 790 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 KRT12Q99456 494 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 NT5C1AQ9BXI3 368 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 HTTP42858 3142 aa23.34■■□□□ 1.33
PTPN13-205ENST00000502971 SEC31AO94979 1220 aaKnown RBP23.33■■□□□ 1.33
PTPN13-205ENST00000502971 CTSHP09668 335 aa23.33■■□□□ 1.33
PTPN13-205ENST00000502971 CTCFP49711 727 aaPredicted RBP23.33■■□□□ 1.33
PTPN13-205ENST00000502971 PTK7Q13308 1070 aa23.33■■□□□ 1.33
PTPN13-205ENST00000502971 ITGA7Q13683 1181 aa23.33■■□□□ 1.33
PTPN13-205ENST00000502971 MAP9Q49MG5 647 aa23.33■■□□□ 1.33
PTPN13-205ENST00000502971 SGO2Q562F6 1265 aa23.33■■□□□ 1.33
PTPN13-205ENST00000502971 BEND6Q5SZJ8 279 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms