RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HS6ST3Q8IZP7 471 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 LEO1Q8WVC0 666 aaPredicted RBP6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 KIF12Q96FN5 646 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 CALML4Q96GE6 196 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 CDK5RAP3Q96JB5 506 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 REEP2Q9BRK0 252 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ZCWPW1Q9H0M4 648 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 CRISPLD1Q9H336 500 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 TASP1Q9H6P5 420 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 RPF1Q9H9Y2 349 aaKnown RBP6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 KIF9Q9HAQ2 790 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 POLD4Q9HCU8 107 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ABCB6Q9NP58 842 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ANKFY1Q9P2R3 1169 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 SEL1LQ9UBV2 794 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 RAB23Q9ULC3 237 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 EML5Q05BV3 1969 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ANAPC1Q9H1A4 1944 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 NCANO14594 1321 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 HELZP42694 1942 aaKnown RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 A0A1W2PRU2 124 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 VWA3AA6NCI4 1184 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 CHURC1-FNTBB4DL54 471 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 SPECC1L-ADORA2AF8WAN1 911 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 NRG2O14511 850 aaPredicted RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 TRDMT1O14717 391 aaKnown RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 PPP1R37O75864 691 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 IL18RAPO95256 599 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 ADRB1P08588 477 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 TCF3P15923 654 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 PFKLP17858 780 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 CCNE1P24864 410 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 DDIT3P35638 169 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 UBA7P41226 1012 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 PNPLA4P41247 253 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 TNFSF9P41273 254 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 VIPR2P41587 438 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 FOSBP53539 338 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 ARPP19P56211 112 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 TMEM132DQ14C87 1099 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 VEPH1Q14D04 833 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 POSTNQ15063 836 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 NFE2Q16621 373 aaPredicted RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 FBXO43Q4G163 708 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 C9orf57Q5W0N0 161 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 DSTYKQ6XUX3 929 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 BRAPQ7Z569 592 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 WDR5BQ86VZ2 330 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 YAF2Q8IY57 180 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 THEM5Q8N1Q8 247 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 CAMKK1Q8N5S9 505 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 ST13P5Q8NFI4 369 aaPredicted RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 CCDC26Q8TAB7 109 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 BPIFB1Q8TDL5 484 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 RAD54LQ92698 747 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 EXOC4Q96A65 974 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 RSPRY1Q96DX4 576 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 TRMT2BQ96GJ1 504 aaKnown RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 ZC3H10Q96K80 434 aaKnown RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 SENP8Q96LD8 212 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 MYRFLQ96LU7 910 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 STRA6Q9BX79 667 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 IL21Q9HBE4 155 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 BLOC1S4Q9NUP1 217 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 THG1LQ9NWX6 298 aaKnown RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 CDV3Q9UKY7 258 aaKnown RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 NDRG2Q9UN36 371 aaKnown RBP6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 MYO16Q9Y6X6 1858 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 GPR179Q6PRD1 2367 aa6.61□□□□□ -1.35
LSM3P4-201ENST00000502948 PTPRDP23468 1912 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 DPYSL4O14531 572 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 KIAA0391O15091 583 aaKnown RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 HRO43593 1189 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 LDHAP00338 332 aaKnown RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 HAPLN1P10915 354 aaPredicted RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 ATF6P18850 670 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 GABRR2P28476 465 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 MATR3P43243 847 aaKnown RBP eCLIP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 RAP1GAPP47736 663 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 TAF6P49848 677 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 SATB1Q01826 763 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 CACNB1Q02641 598 aaPredicted RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 ALCAMQ13740 583 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 SIM2Q14190 667 aaPredicted RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 ITPRIPL2Q3MIP1 535 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 C8orf34Q49A92 452 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 SEZ6Q53EL9 994 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 TMEM196Q5HYL7 178 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 WDR44Q5JSH3 913 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 JADE1Q6IE81 842 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 SLC39A4Q6P5W5 647 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 TSSK4Q6SA08 328 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 PRR23CQ6ZRP0 262 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 DPH6Q7L8W6 267 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 ZNF720Q7Z2F6 126 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 METTL23Q86XA0 190 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 DCP1BQ8IZD4 617 aaKnown RBP6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 CMTM8Q8IZV2 173 aa6.6□□□□□ -1.35
LSM3P4-201ENST00000502948 TMEM86AQ8N2M4 240 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms