RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ACOT2P49753 483 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 HHATQ5VTY9 493 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 MYLK4Q86YV6 388 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-203ENST00000502773 C2orf69Q8N8R5 385 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 SLC20A1Q8WUM9 679 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 THOC1Q96FV9 657 aaKnown RBP7.82□□□□□ -1.16
PDGFC-203ENST00000502773 GDAP1L1Q96MZ0 367 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 TRIM31Q9BZY9 425 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 ELP3Q9H9T3 547 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 RSAD1Q9HA92 442 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 AKT3Q9Y243 479 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 SNX24Q9Y343 169 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 C2CD2Q9Y426 696 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 RIPK3Q9Y572 518 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 CHUKO15111 745 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 UNGP13051 313 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-203ENST00000502773 PLCB4Q15147 1175 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 EFCAB12Q6NXP0 572 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 RHPN2Q8IUC4 686 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 KIRREL3Q8IZU9 778 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 INTS9Q9NV88 658 aaKnown RBP7.82□□□□□ -1.16
PDGFC-203ENST00000502773 DOCK1Q14185 1865 aa7.82□□□□□ -1.16
PDGFC-203ENST00000502773 DCAF8L1A6NGE4 600 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 E7EVH7 732 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 MCF2LO15068 1137 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 CDH16O75309 829 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 IL9RQ01113 521 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 RNASELQ05823 741 aaKnown RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 DGKDQ16760 1214 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 KLHL38Q2WGJ6 581 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 BOLA3Q53S33 107 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 IFNLR1Q8IU57 520 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 TRIM42Q8IWZ5 723 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ZNF606Q8WXB4 792 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ALKBH8Q96BT7 664 aaKnown RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 TBCBQ99426 244 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 C11orf70Q9BRQ4 267 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 GPR88Q9GZN0 384 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 SPC25Q9HBM1 224 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 CYLDQ9NQC7 956 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 TLDC2A0PJX2 215 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ABHD2P08910 425 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 KRT3P12035 628 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 PSMA2P25787 234 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 HPDP32754 393 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 KRT17Q04695 432 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 PRKG1Q13976 671 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 R3HDM1Q15032 1099 aaKnown RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 PDK2Q15119 407 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ARMCX2Q7L311 632 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 VSIG1Q86XK7 387 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 NIPA2Q8N8Q9 360 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ASAP3Q8TDY4 903 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ART4Q93070 314 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ARHGEF26Q96DR7 871 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 GPR20Q99678 358 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 SELENOSQ9BQE4 189 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 AP5M1Q9H0R1 490 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 NOVA2Q9UNW9 492 aaKnown RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 CLEC11AQ9Y240 323 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 USTQ9Y2C2 406 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 SSC5DA1L4H1 1573 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 PEX5P50542 639 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ARL4CP56559 192 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 NFX1Q12986 1120 aaKnown RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 CAPSQ13938 189 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 TMEM132DQ14C87 1099 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 MORF4L2Q15014 288 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 CCDC25Q86WR0 208 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 TATDN2Q93075 761 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 EMID1Q96A84 441 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 TUBB6Q9BUF5 446 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 TRIM7Q9C029 511 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 CCDC113Q9H0I3 377 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 CHRNB2P17787 502 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 NOMO3P69849 1222 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 CCDC14Q49A88 953 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ZBTB33Q86T24 672 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 UNC93AQ86WB7 457 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 CCDC197Q8NCU1 140 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 PPTC7Q8NI37 304 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 HDAC7Q8WUI4 952 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 NLRP4Q96MN2 994 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ABHD16BQ9H3Z7 469 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 FZD8Q9H461 694 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 SMG5Q9UPR3 1016 aaKnown RBP7.81□□□□□ -1.16
PDGFC-203ENST00000502773 ZNF541Q9H0D2 1346 aa7.81□□□□□ -1.16
PDGFC-203ENST00000502773 KRT14P02533 472 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 TAL1P17542 331 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 TPP2P29144 1249 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 LSP1P33241 339 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 EPHX2P34913 555 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 PCK1P35558 622 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 ZNF135P52742 658 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 NLRP11P59045 1033 aaKnown RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 MXRA7P84157 204 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 TFDP3Q5H9I0 405 aa7.8□□□□□ -1.16
PDGFC-203ENST00000502773 TDRD10Q5VZ19 366 aaKnown RBP7.8□□□□□ -1.16
PDGFC-203ENST00000502773 ANKRD23Q86SG2 305 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms