RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 PARVGQ9HBI0 331 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 TAS2R14Q9NYV8 317 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 ANKRD6Q9Y2G4 727 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 PTPN22Q9Y2R2 807 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 VGLL3A8MV65 326 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 F8VZ95 297 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 KRIT1O00522 736 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 RASA4O43374 803 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 DNTTP04053 509 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 MUTP22033 750 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 PSMC2P35998 433 aaKnown RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 SCTRP47872 440 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 TM4SF4P48230 202 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 CORO7P57737 925 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 SLC9A5Q14940 896 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 ARHGAP44Q17R89 818 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 FAM209AQ5JX71 171 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 TRMT1LQ7Z2T5 733 aaKnown RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 ADAT2Q7Z6V5 191 aaKnown RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 NT5DC3Q86UY8 548 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 FAM178BQ8IXR5 827 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 UBXN10Q96LJ8 280 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 FERD3LQ96RJ6 166 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 APOL5Q9BWW9 433 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 GPR88Q9GZN0 384 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 EFCC1Q9HA90 598 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 ZFYVE28Q9HCC9 887 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 FBXO28Q9NVF7 368 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 PPARGC1AQ9UBK2 798 aaKnown RBP9.51□□□□□ -0.89
FN1-227ENST00000498719 DNAJC12Q9UKB3 198 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 GJD2Q9UKL4 321 aa9.51□□□□□ -0.89
FN1-227ENST00000498719 PCNTO95613 3336 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 IQCA1LA6NCM1 817 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 YDJCA8MPS7 323 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 PGRMC1O00264 195 aaKnown RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 BUB1BO60566 1050 aaPredicted RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 GAS7O60861 476 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 SLC34A2O95436 690 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 RPL17P18621 184 aaKnown RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 STAT1P42224 750 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 CD151P48509 253 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 SEPHS1P49903 392 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 ZNF460Q14592 562 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 UAP1Q16222 522 aaPredicted RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 CEP85LQ5SZL2 805 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 RNF19BQ6ZMZ0 732 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 LRRC69Q6ZNQ3 347 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 ZNF720Q7Z2F6 126 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 SLC30A5Q8TAD4 765 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 SLC35G2Q8TBE7 412 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 ACTRT1Q8TDG2 376 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 ARHGEF26Q96DR7 871 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 FUBP3Q96I24 572 aaKnown RBP eCLIP9.5□□□□□ -0.894e-15■□□□□ 10.6
FN1-227ENST00000498719 PBKQ96KB5 322 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 MRIQ9BWK5 157 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 GLIS2Q9BZE0 524 aaPredicted RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 ISCUQ9H1K1 167 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 UNC45AQ9H3U1 944 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 AGPAT3Q9NRZ7 376 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 SEPT11Q9NVA2 429 aaKnown RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 GTF3C4Q9UKN8 822 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 STXBP5LQ9Y2K9 1186 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 UPK3BL1B0FP48 263 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 BHMG1C9JSJ3 638 aaPredicted RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 UPK3BL2E5RIL1 263 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 TPP1O14773 563 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 EIF3DO15371 548 aaKnown RBP eCLIP9.5□□□□□ -0.89
FN1-227ENST00000498719 TTI1O43156 1089 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 DAPK3O43293 454 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 DNAJC8O75937 253 aaPredicted RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 PRKD3O94806 890 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 GAP43P17677 238 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 ENPP1P22413 925 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 HSD17B3P37058 310 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 GABREP78334 506 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 DLG4P78352 724 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 CCNG2Q16589 344 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 CTC1Q2NKJ3 1217 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 DCAF12L1Q5VU92 463 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 MCTP2Q6DN12 878 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 SLFN11Q7Z7L1 901 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 VPS36Q86VN1 386 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 MREGQ8N565 214 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 WHAMMQ8TF30 809 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 SLC5A5Q92911 643 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 CCDC138Q96M89 665 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 ARHGAP9Q9BRR9 750 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 TRIM31Q9BZY9 425 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 PCIF1Q9H4Z3 704 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 LRRC4CQ9HCJ2 640 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 TUFT1Q9NNX1 390 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 NKIRAS2Q9NYR9 191 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 CHORDC1Q9UHD1 332 aaPredicted RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 FBXL5Q9UKA1 691 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 SCAF8Q9UPN6 1271 aaKnown RBP9.5□□□□□ -0.89
FN1-227ENST00000498719 PCDHGB6Q9Y5F9 930 aa9.5□□□□□ -0.89
FN1-227ENST00000498719 ATRNL1Q5VV63 1379 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 GCOM1H8Y6P7 765 aaPredicted RBP9.49□□□□□ -0.89
FN1-227ENST00000498719 DDX3YO15523 660 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms